Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 AAMP-208ENST00000475678 2270 ntTSL 215.92■□□□□ 0.149e-7■■■■□ 21.1
RPS3P23396 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.089e-7■■■■□ 21.1
RPS3P23396 SELENOH-205ENST00000534386 1039 ntTSL 214.25□□□□□ -0.139e-8■■■■□ 21.1
RPS3P23396 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.179e-7■■■■□ 21.1
RPS3P23396 AC097637.1-201ENST00000494383 3695 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.672e-6■■■■□ 21.1
RPS3P23396 AC097637.1-202ENST00000478201 570 ntTSL 210.42□□□□□ -0.742e-6■■■■□ 21.1
RPS3P23396 CLU-208ENST00000521770 520 ntTSL 27.73□□□□□ -1.172e-10■■■■□ 21.1
RPS3P23396 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC26.36■■□□□ 1.812e-7■■■■□ 21.1
RPS3P23396 TMEM132A-207ENST00000537065 324 ntTSL 325.53■■□□□ 1.681e-8■■■■□ 21.1
RPS3P23396 SLC38A10-210ENST00000573058 1627 nt25.15■■□□□ 1.622e-7■■■■□ 21.1
RPS3P23396 GUSB-205ENST00000447929 1983 ntTSL 324.87■■□□□ 1.572e-7■■■■□ 21.1
RPS3P23396 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.59■■□□□ 1.532e-7■■■■□ 21.1
RPS3P23396 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.512e-7■■■■□ 21.1
RPS3P23396 GUSB-203ENST00000430730 1859 ntTSL 524.38■■□□□ 1.492e-7■■■■□ 21.1
RPS3P23396 GUSB-204ENST00000446111 933 ntTSL 1 (best)22.96■■□□□ 1.272e-7■■■■□ 21.1
RPS3P23396 AKAP8L-203ENST00000594594 2251 ntTSL 522.22■■□□□ 1.152e-7■■■■□ 21.1
RPS3P23396 TMEM132A-212ENST00000543732 742 ntTSL 321.74■■□□□ 1.071e-8■■■■□ 21.1
RPS3P23396 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.982e-7■■■■□ 21.1
RPS3P23396 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.973e-6■■■■□ 21.1
RPS3P23396 FGFR1-205ENST00000397090 777 ntTSL 221.09■□□□□ 0.972e-7■■■■□ 21.1
RPS3P23396 PLEC-211ENST00000527303 598 ntTSL 320.88■□□□□ 0.932e-7■■■■□ 21.1
RPS3P23396 PDK1-205ENST00000431718 728 ntTSL 320.29■□□□□ 0.842e-7■■■■□ 21.1
RPS3P23396 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.72e-7■■■■□ 21.1
RPS3P23396 AKAP8L-220ENST00000609519 2113 ntTSL 219.31■□□□□ 0.682e-7■■■■□ 21.1
RPS3P23396 ELOVL1-207ENST00000470968 867 ntTSL 518.28■□□□□ 0.522e-7■■■■□ 21.1
RPS3P23396 AKAP8L-202ENST00000593845 2749 ntTSL 217.52■□□□□ 0.42e-7■■■■□ 21.1
RPS3P23396 TFR2-211ENST00000475011 610 ntTSL 217.36■□□□□ 0.373e-19■■■■□ 21.1
RPS3P23396 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.32e-7■■■■□ 21.1
RPS3P23396 NECAP2-209ENST00000504858 727 ntTSL 516.32■□□□□ 0.22e-7■■■■□ 21.1
RPS3P23396 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.32■□□□□ 0.22e-7■■■■□ 21.1
RPS3P23396 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.172e-7■■■■□ 21.1
RPS3P23396 GUSB-213ENST00000479038 452 ntTSL 315.85■□□□□ 0.132e-7■■■■□ 21.1
RPS3P23396 GUSB-211ENST00000476486 776 ntTSL 315.69■□□□□ 0.12e-7■■■■□ 21.1
RPS3P23396 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.59■□□□□ 0.092e-7■■■■□ 21.1
RPS3P23396 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.042e-7■■■■□ 21.1
RPS3P23396 CD276-204ENST00000557951 695 ntTSL 215.29■□□□□ 0.042e-7■■■■□ 21.1
RPS3P23396 CRELD1-204ENST00000414117 723 ntTSL 514.88□□□□□ -0.034e-6■■■■□ 21.1
RPS3P23396 ELOVL1-203ENST00000464204 1034 ntTSL 1 (best)14.77□□□□□ -0.052e-7■■■■□ 21.1
RPS3P23396 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.12e-7■■■■□ 21.1
RPS3P23396 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.122e-7■■■■□ 21.1
RPS3P23396 LAMB2-203ENST00000462930 536 ntTSL 214.24□□□□□ -0.133e-16■■■■□ 21.1
RPS3P23396 USP11-212ENST00000497179 900 ntTSL 514.23□□□□□ -0.132e-7■■■■□ 21.1
RPS3P23396 GUSB-212ENST00000478118 571 ntTSL 414.21□□□□□ -0.132e-7■■■■□ 21.1
RPS3P23396 ELOVL1-212ENST00000487209 828 ntTSL 213.91□□□□□ -0.182e-7■■■■□ 21.1
RPS3P23396 CD276-206ENST00000559073 1844 ntTSL 1 (best)13.83□□□□□ -0.22e-7■■■■□ 21.1
RPS3P23396 S100A6-203ENST00000462776 479 ntTSL 213.7□□□□□ -0.222e-7■■■■□ 21.1
RPS3P23396 NECAP2-204ENST00000459640 981 ntTSL 313.66□□□□□ -0.222e-7■■■■□ 21.1
RPS3P23396 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.232e-7■■■■□ 21.1
RPS3P23396 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.49□□□□□ -0.252e-7■■■■□ 21.1
RPS3P23396 CD276-212ENST00000561176 640 ntTSL 313.22□□□□□ -0.292e-7■■■■□ 21.1
RPS3P23396 NECAP2-212ENST00000513161 713 ntTSL 512.57□□□□□ -0.42e-7■■■■□ 21.1
RPS3P23396 NECAP2-206ENST00000492095 1787 ntTSL 212.56□□□□□ -0.42e-7■■■■□ 21.1
RPS3P23396 ELOVL1-213ENST00000496932 779 ntTSL 312.36□□□□□ -0.432e-7■■■■□ 21.1
RPS3P23396 ELOVL1-204ENST00000465321 726 ntTSL 512.01□□□□□ -0.492e-7■■■■□ 21.1
RPS3P23396 MOV10-204ENST00000413052 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.512e-10■■■■□ 21.1
RPS3P23396 ELOVL1-202ENST00000413844 1451 ntTSL 2 BASIC11.79□□□□□ -0.522e-7■■■■□ 21.1
RPS3P23396 MOV10-203ENST00000369645 3552 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.62e-10■■■■□ 21.1
RPS3P23396 PDK1-201ENST00000282077 14193 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.612e-7■■■■□ 21.1
RPS3P23396 NECAP2-207ENST00000496239 4619 ntTSL 210.58□□□□□ -0.722e-7■■■■□ 21.1
RPS3P23396 ECE1-213ENST00000531334 653 ntTSL 210.13□□□□□ -0.792e-7■■■■□ 21.1
RPS3P23396 PDK1-208ENST00000443353 842 ntTSL 29.88□□□□□ -0.832e-7■■■■□ 21.1
RPS3P23396 MOV10-201ENST00000357443 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.842e-10■■■■□ 21.1
RPS3P23396 SLC39A6-201ENST00000269187 3543 ntAPPRIS P3 TSL 2 BASIC9.53□□□□□ -0.882e-7■■■■□ 21.1
RPS3P23396 POLR1A-205ENST00000462078 469 ntTSL 59.32□□□□□ -0.922e-7■■■■□ 21.1
RPS3P23396 MOV10-202ENST00000369644 4100 ntTSL 1 (best) BASIC9.3□□□□□ -0.922e-10■■■■□ 21.1
RPS3P23396 S100A6-204ENST00000462951 311 ntTSL 1 (best)9□□□□□ -0.972e-7■■■■□ 21.1
RPS3P23396 GUSB-210ENST00000475316 505 ntTSL 38.73□□□□□ -1.012e-7■■■■□ 21.1
RPS3P23396 MOV10-217ENST00000496577 4312 ntTSL 28.62□□□□□ -1.032e-10■■■■□ 21.1
RPS3P23396 MOV10-206ENST00000468624 4689 ntTSL 58.51□□□□□ -1.052e-10■■■■□ 21.1
RPS3P23396 PDK1-206ENST00000436490 571 ntTSL 57.14□□□□□ -1.272e-7■■■■□ 21.1
RPS3P23396 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.338e-7■■■■□ 21.1
RPS3P23396 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.781e-7■■■■□ 21.1
RPS3P23396 IDH1-203ENST00000415913 2441 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.751e-7■■■■□ 21.1
RPS3P23396 BLVRB-203ENST00000597870 1392 ntTSL 518.18■□□□□ 0.57e-27■■■■□ 21.1
RPS3P23396 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.117e-27■■■■□ 21.1
RPS3P23396 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC13.14□□□□□ -0.317e-27■■■■□ 21.1
RPS3P23396 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.565e-8■■■■□ 21.1
RPS3P23396 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.28■□□□□ 0.365e-8■■■■□ 21.1
RPS3P23396 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.21■□□□□ 0.355e-8■■■■□ 21.1
RPS3P23396 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.32■□□□□ 0.25e-8■■■■□ 21.1
RPS3P23396 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.132e-10■■■■□ 21.1
RPS3P23396 COX5A-205ENST00000568517 582 ntTSL 3 BASIC13.34□□□□□ -0.275e-8■■■■□ 21.1
RPS3P23396 AFMID-213ENST00000591538 487 ntTSL 316.4■□□□□ 0.223e-15■■■■□ 21.1
RPS3P23396 DNPH1-203ENST00000505042 396 ntTSL 211.82□□□□□ -0.522e-6■■■■□ 21.1
RPS3P23396 ORC1-201ENST00000371566 3080 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.783e-7■■■■□ 21.1
RPS3P23396 ORC1-202ENST00000371568 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.83e-7■■■■□ 21.1
RPS3P23396 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.21e-10■■■■□ 21.1
RPS3P23396 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.71■□□□□ 0.271e-6■■■■□ 21.1
RPS3P23396 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.191e-6■■■■□ 21.1
RPS3P23396 ADH5-203ENST00000502590 697 ntTSL 59.66□□□□□ -0.863e-7■■■■□ 21.1
RPS3P23396 ADH5-204ENST00000503130 786 ntTSL 39.64□□□□□ -0.873e-7■■■■□ 21.1
RPS3P23396 ADH5-208ENST00000508511 1909 ntTSL 28.8□□□□□ -13e-7■■■■□ 21.1
RPS3P23396 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.192e-6■■■■□ 21.1
RPS3P23396 AC092587.1-201ENST00000410042 669 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.462e-6■■■■□ 21.1
RPS3P23396 MRPL30-204ENST00000465432 1752 ntTSL 59.41□□□□□ -0.92e-6■■■■□ 21.1
RPS3P23396 MRPL30-201ENST00000338148 2605 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.992e-6■■■■□ 21.1
RPS3P23396 DPM1-206ENST00000494752 789 ntTSL 38.84□□□□□ -0.991e-6■■■■□ 21.1
RPS3P23396 MRPL30-203ENST00000409841 1497 ntTSL 55.01□□□□□ -1.612e-6■■■■□ 21.1
RPS3P23396 MRPL30-205ENST00000473743 567 ntTSL 54.12□□□□□ -1.752e-6■■■■□ 21.1
RPS3P23396 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.61e-6■■■■□ 21.1
Retrieved 100 of 24,271 protein–RNA pairs in 424.3 ms