RNA–Protein interactions for RNA: ENST00000496239.5

NECAP2-207, Transcript of NECAP endocytosis associated 2, humanhuman

TSL 2

Gene NECAP2, Length 4,619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP2-207ENST00000496239 NISCHQ9Y2I1 1504 aa20.98■□□□□ 0.95
NECAP2-207ENST00000496239 DCAF8L2P0C7V8 631 aa20.67■□□□□ 0.9
NECAP2-207ENST00000496239 SHROOM4Q9ULL8 1493 aa19.06■□□□□ 0.64
NECAP2-207ENST00000496239 SUPT5HO00267 1087 aaKnown RBP18.91■□□□□ 0.62
NECAP2-207ENST00000496239 ABCC9O60706 1549 aa18.52■□□□□ 0.56
NECAP2-207ENST00000496239 PABPN1Q86U42 306 aaKnown RBP eCLIP18.09■□□□□ 0.49
NECAP2-207ENST00000496239 EHMT2Q96KQ7 1210 aa18.01■□□□□ 0.47
NECAP2-207ENST00000496239 FAM9AQ8IZU1 332 aaPredicted RBP17.76■□□□□ 0.43
NECAP2-207ENST00000496239 TRIM41Q8WV44 630 aa17.61■□□□□ 0.41
NECAP2-207ENST00000496239 CCDC180Q9P1Z9 1646 aa17.59■□□□□ 0.41
NECAP2-207ENST00000496239 RANGAP1P46060 587 aaPredicted RBP17.53■□□□□ 0.4
NECAP2-207ENST00000496239 APLP2Q06481 763 aa17.52■□□□□ 0.4
NECAP2-207ENST00000496239 ATP1B4Q9UN42 357 aaPredicted RBP17.36■□□□□ 0.37
NECAP2-207ENST00000496239 UBTFP17480 764 aaKnown RBP17.34■□□□□ 0.37
NECAP2-207ENST00000496239 SCRIBQ14160 1630 aa17.33■□□□□ 0.37
NECAP2-207ENST00000496239 ZCCHC6Q5VYS8 1495 aaKnown RBP17.31■□□□□ 0.36
NECAP2-207ENST00000496239 RB1CC1Q8TDY2 1594 aa17.29■□□□□ 0.36
NECAP2-207ENST00000496239 TTBK1Q5TCY1 1321 aaPredicted RBP17.2■□□□□ 0.34
NECAP2-207ENST00000496239 NACADO15069 1562 aa17.12■□□□□ 0.33
NECAP2-207ENST00000496239 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.03■□□□□ 0.32
NECAP2-207ENST00000496239 HNRNPUL2Q1KMD3 747 aaKnown RBP17.03■□□□□ 0.32
NECAP2-207ENST00000496239 FBLN2P98095 1184 aa17.02■□□□□ 0.32
NECAP2-207ENST00000496239 CHIC1Q5VXU3 224 aa16.87■□□□□ 0.29
NECAP2-207ENST00000496239 MYT1LQ9UL68 1186 aa16.85■□□□□ 0.29
NECAP2-207ENST00000496239 DCAF1Q9Y4B6 1507 aa16.71■□□□□ 0.27
NECAP2-207ENST00000496239 PPARGC1BQ86YN6 1023 aaKnown RBP16.68■□□□□ 0.26
NECAP2-207ENST00000496239 LOC105371045A0A1W2PR82 267 aa16.68■□□□□ 0.26
NECAP2-207ENST00000496239 BAZ1BQ9UIG0 1483 aaKnown RBP16.61■□□□□ 0.25
NECAP2-207ENST00000496239 PCGF6Q9BYE7 350 aa16.6■□□□□ 0.25
NECAP2-207ENST00000496239 ITGAEP38570 1179 aa16.56■□□□□ 0.24
NECAP2-207ENST00000496239 RSF1Q96T23 1441 aaPredicted RBP16.53■□□□□ 0.24
NECAP2-207ENST00000496239 ERCC6Q03468 1493 aa16.53■□□□□ 0.24
NECAP2-207ENST00000496239 CECR2Q9BXF3 1484 aa16.51■□□□□ 0.23
NECAP2-207ENST00000496239 CSRNP3Q8WYN3 585 aa16.5■□□□□ 0.23
NECAP2-207ENST00000496239 P3H3Q8IVL6 736 aa16.5■□□□□ 0.23
NECAP2-207ENST00000496239 CHMP7Q8WUX9 453 aaPredicted RBP16.48■□□□□ 0.23
NECAP2-207ENST00000496239 BAZ1AQ9NRL2 1556 aaPredicted RBP16.47■□□□□ 0.23
NECAP2-207ENST00000496239 MYO15BQ96JP2 1530 aa16.47■□□□□ 0.23
NECAP2-207ENST00000496239 ARID3CA6NKF2 412 aa16.46■□□□□ 0.22
NECAP2-207ENST00000496239 NPM1P06748 294 aaKnown RBP eCLIP16.43■□□□□ 0.22
NECAP2-207ENST00000496239 CCER1Q8TC90 406 aaPredicted RBP16.39■□□□□ 0.22
NECAP2-207ENST00000496239 FAM50AQ14320 339 aaKnown RBP16.3■□□□□ 0.2
NECAP2-207ENST00000496239 CDK11AQ9UQ88 783 aaPredicted RBP16.26■□□□□ 0.19
NECAP2-207ENST00000496239 SMARCA2P51531 1590 aa16.25■□□□□ 0.19
NECAP2-207ENST00000496239 MROH2BQ7Z745 1585 aa16.23■□□□□ 0.19
NECAP2-207ENST00000496239 PDS5BQ9NTI5 1447 aa16.22■□□□□ 0.19
NECAP2-207ENST00000496239 WRNQ14191 1432 aaPredicted RBP eCLIP16.18■□□□□ 0.182e-6■■■■□ 22.3
NECAP2-207ENST00000496239 ZNF777Q9ULD5 760 aaPredicted RBP16.18■□□□□ 0.18
NECAP2-207ENST00000496239 TRIM26Q12899 539 aaPredicted RBP16.13■□□□□ 0.17
NECAP2-207ENST00000496239 ATAD2BQ9ULI0 1458 aa16.12■□□□□ 0.17
NECAP2-207ENST00000496239 TRIM52Q96A61 297 aa16.11■□□□□ 0.17
NECAP2-207ENST00000496239 CADPSQ9ULU8 1353 aa16.09■□□□□ 0.17
NECAP2-207ENST00000496239 ESF1Q9H501 851 aaKnown RBP16.06■□□□□ 0.16
NECAP2-207ENST00000496239 KIF27Q86VH2 1401 aa16.05■□□□□ 0.16
NECAP2-207ENST00000496239 CCDC88BA6NC98 1476 aa16.04■□□□□ 0.16
NECAP2-207ENST00000496239 ZEB1P37275 1124 aaPredicted RBP16.02■□□□□ 0.16
NECAP2-207ENST00000496239 KCNH8Q96L42 1107 aa16.02■□□□□ 0.15
NECAP2-207ENST00000496239 PLPPR3Q6T4P5 718 aa16■□□□□ 0.15
NECAP2-207ENST00000496239 POLR3GLQ9BT43 218 aa15.98■□□□□ 0.15
NECAP2-207ENST00000496239 TRHP20396 242 aaPredicted RBP15.97■□□□□ 0.15
NECAP2-207ENST00000496239 TDRD9Q8NDG6 1382 aaKnown RBP15.97■□□□□ 0.15
NECAP2-207ENST00000496239 EIF4G1Q04637 1599 aaKnown RBP15.96■□□□□ 0.14
NECAP2-207ENST00000496239 DNAJC5BQ9UF47 199 aa15.96■□□□□ 0.14
NECAP2-207ENST00000496239 SMARCA4P51532 1647 aa15.95■□□□□ 0.14
NECAP2-207ENST00000496239 CUX2O14529 1486 aa15.94■□□□□ 0.14
NECAP2-207ENST00000496239 SOGA1O94964 1423 aa15.93■□□□□ 0.14
NECAP2-207ENST00000496239 WIZO95785 1651 aa15.93■□□□□ 0.14
NECAP2-207ENST00000496239 PLEKHD1A6NEE1 506 aa15.93■□□□□ 0.14
NECAP2-207ENST00000496239 BCANQ96GW7 911 aa15.91■□□□□ 0.14
NECAP2-207ENST00000496239 CEP164Q9UPV0 1460 aa15.9■□□□□ 0.14
NECAP2-207ENST00000496239 EEA1Q15075 1411 aa15.89■□□□□ 0.14
NECAP2-207ENST00000496239 TOP2AP11388 1531 aaKnown RBP15.89■□□□□ 0.13
NECAP2-207ENST00000496239 NCAPD3P42695 1498 aa15.87■□□□□ 0.13
NECAP2-207ENST00000496239 MTUS2Q5JR59 1369 aa15.86■□□□□ 0.13
NECAP2-207ENST00000496239 SLC4A1APQ9BWU0 796 aaKnown RBP15.86■□□□□ 0.13
NECAP2-207ENST00000496239 CARMIL1Q5VZK9 1371 aa15.86■□□□□ 0.13
NECAP2-207ENST00000496239 TSPY4P0CV99 314 aa15.84■□□□□ 0.13
NECAP2-207ENST00000496239 TSPY10P0CW01 314 aa15.84■□□□□ 0.13
NECAP2-207ENST00000496239 FANCD2Q9BXW9 1451 aa15.83■□□□□ 0.13
NECAP2-207ENST00000496239 CLIP1P30622 1438 aa15.82■□□□□ 0.12
NECAP2-207ENST00000496239 NEUROD1Q13562 356 aa15.8■□□□□ 0.12
NECAP2-207ENST00000496239 ZNF326Q5BKZ1 582 aaKnown RBP15.8■□□□□ 0.12
NECAP2-207ENST00000496239 STAG3Q9UJ98 1225 aa15.8■□□□□ 0.12
NECAP2-207ENST00000496239 CC2D2AQ9P2K1 1620 aa15.77■□□□□ 0.12
NECAP2-207ENST00000496239 CHGAP10645 457 aaKnown RBP15.77■□□□□ 0.12
NECAP2-207ENST00000496239 CNGB1Q14028 1251 aaPredicted RBP15.77■□□□□ 0.12
NECAP2-207ENST00000496239 CHIC2Q9UKJ5 165 aa15.77■□□□□ 0.12
NECAP2-207ENST00000496239 OSCARQ8IYS5 282 aa15.76■□□□□ 0.11
NECAP2-207ENST00000496239 GOLGA3Q08378 1498 aa15.76■□□□□ 0.11
NECAP2-207ENST00000496239 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.75■□□□□ 0.116e-6■■■□□ 19.2
NECAP2-207ENST00000496239 ARID4BQ4LE39 1312 aaPredicted RBP15.74■□□□□ 0.11
NECAP2-207ENST00000496239 ABCC8Q09428 1581 aa15.72■□□□□ 0.11
NECAP2-207ENST00000496239 CYB5RLQ6IPT4 315 aa15.69■□□□□ 0.1
NECAP2-207ENST00000496239 CARMIL2Q6F5E8 1435 aa15.68■□□□□ 0.1
NECAP2-207ENST00000496239 CFDP1Q9UEE9 299 aaPredicted RBP15.68■□□□□ 0.1
NECAP2-207ENST00000496239 JPH4Q96JJ6 628 aa15.66■□□□□ 0.1
NECAP2-207ENST00000496239 BICRAQ9NZM4 1560 aa15.65■□□□□ 0.1
NECAP2-207ENST00000496239 NESP48681 1621 aa15.63■□□□□ 0.09
NECAP2-207ENST00000496239 CEP162Q5TB80 1403 aa15.61■□□□□ 0.09
NECAP2-207ENST00000496239 TNIKQ9UKE5 1360 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms