Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ERCC3P19447 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ERCC3P19447 CD37-204ENST00000535669 1674 ntTSL 2 BASIC22.3■■□□□ 1.16
ERCC3P19447 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC22.3■■□□□ 1.16
ERCC3P19447 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC22.29■■□□□ 1.16
ERCC3P19447 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC22.29■■□□□ 1.16
ERCC3P19447 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
ERCC3P19447 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC22.29■■□□□ 1.16
ERCC3P19447 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC22.29■■□□□ 1.16
ERCC3P19447 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ERCC3P19447 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC22.29■■□□□ 1.16
ERCC3P19447 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC22.29■■□□□ 1.16
ERCC3P19447 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC22.29■■□□□ 1.16
ERCC3P19447 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC22.29■■□□□ 1.16
ERCC3P19447 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC22.29■■□□□ 1.16
ERCC3P19447 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC22.29■■□□□ 1.16
ERCC3P19447 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ERCC3P19447 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ERCC3P19447 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
ERCC3P19447 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
ERCC3P19447 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC22.28■■□□□ 1.16
ERCC3P19447 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
ERCC3P19447 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC22.28■■□□□ 1.16
ERCC3P19447 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ERCC3P19447 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC22.28■■□□□ 1.16
ERCC3P19447 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ERCC3P19447 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ERCC3P19447 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
ERCC3P19447 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
ERCC3P19447 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ERCC3P19447 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC22.28■■□□□ 1.16
ERCC3P19447 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
ERCC3P19447 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ERCC3P19447 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ERCC3P19447 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC22.28■■□□□ 1.16
ERCC3P19447 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC22.28■■□□□ 1.16
ERCC3P19447 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC22.28■■□□□ 1.16
ERCC3P19447 GPX4-207ENST00000589115 812 ntTSL 2 BASIC22.28■■□□□ 1.16
ERCC3P19447 AC010653.2-201ENST00000623505 997 ntBASIC22.28■■□□□ 1.16
ERCC3P19447 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ERCC3P19447 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ERCC3P19447 AC092338.2-201ENST00000568827 1415 ntBASIC22.28■■□□□ 1.16
ERCC3P19447 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ERCC3P19447 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC22.28■■□□□ 1.16
ERCC3P19447 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
ERCC3P19447 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
ERCC3P19447 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ERCC3P19447 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ERCC3P19447 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ERCC3P19447 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
ERCC3P19447 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ERCC3P19447 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC22.27■■□□□ 1.16
ERCC3P19447 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ERCC3P19447 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ERCC3P19447 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC22.27■■□□□ 1.16
ERCC3P19447 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC22.27■■□□□ 1.16
ERCC3P19447 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC22.27■■□□□ 1.16
ERCC3P19447 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
ERCC3P19447 AL160286.2-201ENST00000567150 934 ntBASIC22.27■■□□□ 1.16
ERCC3P19447 LINC01238-205ENST00000567549 1107 ntBASIC22.27■■□□□ 1.16
ERCC3P19447 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC22.27■■□□□ 1.16
ERCC3P19447 AL023803.3-201ENST00000615559 522 ntBASIC22.27■■□□□ 1.16
ERCC3P19447 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC22.27■■□□□ 1.16
ERCC3P19447 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC22.27■■□□□ 1.16
ERCC3P19447 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ERCC3P19447 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC22.27■■□□□ 1.16
ERCC3P19447 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
ERCC3P19447 MOK-225ENST00000522867 1883 ntTSL 5 BASIC22.26■■□□□ 1.15
ERCC3P19447 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
ERCC3P19447 AP001271.2-201ENST00000624018 1556 ntBASIC22.26■■□□□ 1.15
ERCC3P19447 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ERCC3P19447 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
ERCC3P19447 RNF152P1-201ENST00000397754 604 ntBASIC22.26■■□□□ 1.15
ERCC3P19447 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
ERCC3P19447 NME1-207ENST00000480143 964 ntTSL 2 BASIC22.26■■□□□ 1.15
ERCC3P19447 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC22.26■■□□□ 1.15
ERCC3P19447 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ERCC3P19447 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC22.26■■□□□ 1.15
ERCC3P19447 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
ERCC3P19447 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
ERCC3P19447 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
ERCC3P19447 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC22.26■■□□□ 1.15
ERCC3P19447 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC22.26■■□□□ 1.15
ERCC3P19447 USP39-204ENST00000409766 2033 ntTSL 2 BASIC22.26■■□□□ 1.15
ERCC3P19447 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
ERCC3P19447 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC22.26■■□□□ 1.15
ERCC3P19447 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ERCC3P19447 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
ERCC3P19447 LINC01465-201ENST00000408887 1940 ntBASIC22.25■■□□□ 1.15
ERCC3P19447 AC099778.1-201ENST00000568593 1911 ntBASIC22.25■■□□□ 1.15
ERCC3P19447 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC22.25■■□□□ 1.15
ERCC3P19447 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ERCC3P19447 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ERCC3P19447 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ERCC3P19447 FAM8A6P-201ENST00000407496 1135 ntBASIC22.25■■□□□ 1.15
ERCC3P19447 CD70-202ENST00000423145 881 ntTSL 2 BASIC22.25■■□□□ 1.15
ERCC3P19447 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ERCC3P19447 YBX1P2-201ENST00000489612 999 ntBASIC22.25■■□□□ 1.15
ERCC3P19447 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
ERCC3P19447 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms