Protein–RNA interactions for Protein: P06028

GYPB, Glycophorin-B, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GYPBP06028 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GYPBP06028 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
GYPBP06028 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
GYPBP06028 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.3■□□□□ 0.36
GYPBP06028 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
GYPBP06028 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GYPBP06028 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
GYPBP06028 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
GYPBP06028 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
GYPBP06028 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GYPBP06028 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.3■□□□□ 0.36
GYPBP06028 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.29■□□□□ 0.36
GYPBP06028 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.29■□□□□ 0.36
GYPBP06028 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
GYPBP06028 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GYPBP06028 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GYPBP06028 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GYPBP06028 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GYPBP06028 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
GYPBP06028 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.29■□□□□ 0.36
GYPBP06028 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.29■□□□□ 0.36
GYPBP06028 AC006970.2-201ENST00000450065 779 ntBASIC17.29■□□□□ 0.36
GYPBP06028 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.29■□□□□ 0.36
GYPBP06028 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.29■□□□□ 0.36
GYPBP06028 AL121832.2-201ENST00000610979 668 ntBASIC17.29■□□□□ 0.36
GYPBP06028 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.29■□□□□ 0.36
GYPBP06028 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.29■□□□□ 0.36
GYPBP06028 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
GYPBP06028 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.29■□□□□ 0.36
GYPBP06028 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GYPBP06028 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.29■□□□□ 0.36
GYPBP06028 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.29■□□□□ 0.36
GYPBP06028 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GYPBP06028 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
GYPBP06028 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GYPBP06028 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.29■□□□□ 0.36
GYPBP06028 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.28■□□□□ 0.36
GYPBP06028 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GYPBP06028 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GYPBP06028 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GYPBP06028 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GYPBP06028 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
GYPBP06028 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
GYPBP06028 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
GYPBP06028 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.28■□□□□ 0.36
GYPBP06028 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
GYPBP06028 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.28■□□□□ 0.36
GYPBP06028 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
GYPBP06028 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GYPBP06028 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GYPBP06028 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GYPBP06028 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
GYPBP06028 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GYPBP06028 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GYPBP06028 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.28■□□□□ 0.36
GYPBP06028 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.28■□□□□ 0.36
GYPBP06028 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GYPBP06028 AC091874.3-201ENST00000512672 1195 ntBASIC17.28■□□□□ 0.36
GYPBP06028 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.28■□□□□ 0.36
GYPBP06028 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.28■□□□□ 0.36
GYPBP06028 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
GYPBP06028 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.28■□□□□ 0.36
GYPBP06028 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GYPBP06028 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.28■□□□□ 0.36
GYPBP06028 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
GYPBP06028 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
GYPBP06028 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GYPBP06028 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
GYPBP06028 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GYPBP06028 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
GYPBP06028 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GYPBP06028 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
GYPBP06028 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
GYPBP06028 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.28■□□□□ 0.36
GYPBP06028 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
GYPBP06028 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
GYPBP06028 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GYPBP06028 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GYPBP06028 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GYPBP06028 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
GYPBP06028 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
GYPBP06028 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GYPBP06028 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
GYPBP06028 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
GYPBP06028 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
GYPBP06028 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
GYPBP06028 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GYPBP06028 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
GYPBP06028 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GYPBP06028 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GYPBP06028 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.27■□□□□ 0.36
GYPBP06028 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.27■□□□□ 0.36
GYPBP06028 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
GYPBP06028 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.27■□□□□ 0.36
GYPBP06028 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
GYPBP06028 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GYPBP06028 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.36
GYPBP06028 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.27■□□□□ 0.36
GYPBP06028 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GYPBP06028 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms