Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.56■□□□□ 0.72
HLA-DQB2P05538 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.56■□□□□ 0.72
HLA-DQB2P05538 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.56■□□□□ 0.72
HLA-DQB2P05538 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
HLA-DQB2P05538 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DQB2P05538 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DQB2P05538 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DQB2P05538 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DQB2P05538 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DQB2P05538 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.56■□□□□ 0.72
HLA-DQB2P05538 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DQB2P05538 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DQB2P05538 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DQB2P05538 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DQB2P05538 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DQB2P05538 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DQB2P05538 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DQB2P05538 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
HLA-DQB2P05538 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.55■□□□□ 0.72
HLA-DQB2P05538 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DQB2P05538 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.55■□□□□ 0.72
HLA-DQB2P05538 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.55■□□□□ 0.72
HLA-DQB2P05538 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.55■□□□□ 0.72
HLA-DQB2P05538 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.55■□□□□ 0.72
HLA-DQB2P05538 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
HLA-DQB2P05538 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.55■□□□□ 0.72
HLA-DQB2P05538 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.55■□□□□ 0.72
HLA-DQB2P05538 CR392000.1-201ENST00000624770 1228 ntBASIC19.55■□□□□ 0.72
HLA-DQB2P05538 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.55■□□□□ 0.72
HLA-DQB2P05538 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.55■□□□□ 0.72
HLA-DQB2P05538 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.55■□□□□ 0.72
HLA-DQB2P05538 KRT8P41-201ENST00000533985 1514 ntBASIC19.55■□□□□ 0.72
HLA-DQB2P05538 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DQB2P05538 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DQB2P05538 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DQB2P05538 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DQB2P05538 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
HLA-DQB2P05538 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.54■□□□□ 0.72
HLA-DQB2P05538 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DQB2P05538 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.54■□□□□ 0.72
HLA-DQB2P05538 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DQB2P05538 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.54■□□□□ 0.72
HLA-DQB2P05538 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
HLA-DQB2P05538 KRT16P1-201ENST00000399124 1418 ntBASIC19.54■□□□□ 0.72
HLA-DQB2P05538 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DQB2P05538 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
HLA-DQB2P05538 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DQB2P05538 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
HLA-DQB2P05538 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DQB2P05538 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DQB2P05538 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.54■□□□□ 0.72
HLA-DQB2P05538 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.54■□□□□ 0.72
HLA-DQB2P05538 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.54■□□□□ 0.72
HLA-DQB2P05538 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.54■□□□□ 0.72
HLA-DQB2P05538 AC073195.1-201ENST00000607241 877 ntBASIC19.54■□□□□ 0.72
HLA-DQB2P05538 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DQB2P05538 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.54■□□□□ 0.72
HLA-DQB2P05538 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DQB2P05538 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DQB2P05538 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DQB2P05538 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.54■□□□□ 0.72
HLA-DQB2P05538 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DQB2P05538 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.54■□□□□ 0.72
HLA-DQB2P05538 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DQB2P05538 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.53■□□□□ 0.72
HLA-DQB2P05538 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DQB2P05538 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DQB2P05538 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DQB2P05538 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DQB2P05538 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.53■□□□□ 0.72
HLA-DQB2P05538 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DQB2P05538 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DQB2P05538 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.53■□□□□ 0.72
HLA-DQB2P05538 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
HLA-DQB2P05538 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.53■□□□□ 0.72
HLA-DQB2P05538 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.53■□□□□ 0.72
HLA-DQB2P05538 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.53■□□□□ 0.72
HLA-DQB2P05538 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DQB2P05538 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DQB2P05538 AC131212.4-201ENST00000623606 975 ntBASIC19.53■□□□□ 0.72
HLA-DQB2P05538 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.53■□□□□ 0.72
HLA-DQB2P05538 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DQB2P05538 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
HLA-DQB2P05538 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DQB2P05538 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
HLA-DQB2P05538 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
HLA-DQB2P05538 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.52■□□□□ 0.72
HLA-DQB2P05538 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.52■□□□□ 0.72
HLA-DQB2P05538 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DQB2P05538 AL135905.2-201ENST00000584934 1404 ntBASIC19.52■□□□□ 0.72
HLA-DQB2P05538 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DQB2P05538 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.52■□□□□ 0.72
HLA-DQB2P05538 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DQB2P05538 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DQB2P05538 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DQB2P05538 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
HLA-DQB2P05538 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
HLA-DQB2P05538 RPS2P55-201ENST00000397318 883 ntBASIC19.52■□□□□ 0.72
HLA-DQB2P05538 FAM197Y1-201ENST00000421178 764 ntBASIC19.52■□□□□ 0.72
HLA-DQB2P05538 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms