Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CHGBP05060 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CHGBP05060 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC23.2■■□□□ 1.3
CHGBP05060 PKD1P6-201ENST00000343738 4769 ntBASIC23.2■■□□□ 1.3
CHGBP05060 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CHGBP05060 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC23.2■■□□□ 1.3
CHGBP05060 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC23.2■■□□□ 1.3
CHGBP05060 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CHGBP05060 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC23.2■■□□□ 1.3
CHGBP05060 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC23.2■■□□□ 1.3
CHGBP05060 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CHGBP05060 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
CHGBP05060 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC23.2■■□□□ 1.3
CHGBP05060 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC23.2■■□□□ 1.3
CHGBP05060 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC23.2■■□□□ 1.3
CHGBP05060 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHGBP05060 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC23.19■■□□□ 1.3
CHGBP05060 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHGBP05060 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC23.19■■□□□ 1.3
CHGBP05060 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHGBP05060 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHGBP05060 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CHGBP05060 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC23.19■■□□□ 1.3
CHGBP05060 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CHGBP05060 MIR1238-201ENST00000408483 83 ntBASIC23.19■■□□□ 1.3
CHGBP05060 AC004951.3-201ENST00000418645 1148 ntBASIC23.19■■□□□ 1.3
CHGBP05060 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC23.19■■□□□ 1.3
CHGBP05060 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CHGBP05060 ARL16-209ENST00000573715 763 ntTSL 3 BASIC23.19■■□□□ 1.3
CHGBP05060 ARL16-211ENST00000576135 694 ntTSL 3 BASIC23.19■■□□□ 1.3
CHGBP05060 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHGBP05060 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
CHGBP05060 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC23.19■■□□□ 1.3
CHGBP05060 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC23.19■■□□□ 1.3
CHGBP05060 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHGBP05060 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHGBP05060 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC23.18■■□□□ 1.3
CHGBP05060 FSCN1P1-201ENST00000568912 1481 ntBASIC23.18■■□□□ 1.3
CHGBP05060 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CHGBP05060 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
CHGBP05060 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHGBP05060 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC23.18■■□□□ 1.3
CHGBP05060 AC087499.1-201ENST00000418141 1075 ntBASIC23.18■■□□□ 1.3
CHGBP05060 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHGBP05060 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CHGBP05060 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC23.18■■□□□ 1.3
CHGBP05060 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHGBP05060 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHGBP05060 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHGBP05060 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHGBP05060 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHGBP05060 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
CHGBP05060 KRT8P11-201ENST00000409686 1436 ntBASIC23.17■■□□□ 1.3
CHGBP05060 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHGBP05060 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHGBP05060 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHGBP05060 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC23.17■■□□□ 1.3
CHGBP05060 AC005332.7-201ENST00000614046 2005 ntBASIC23.17■■□□□ 1.3
CHGBP05060 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHGBP05060 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHGBP05060 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHGBP05060 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC23.17■■□□□ 1.3
CHGBP05060 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CHGBP05060 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC23.17■■□□□ 1.3
CHGBP05060 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHGBP05060 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC23.17■■□□□ 1.3
CHGBP05060 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHGBP05060 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHGBP05060 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC23.17■■□□□ 1.3
CHGBP05060 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
CHGBP05060 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHGBP05060 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHGBP05060 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CHGBP05060 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC23.16■■□□□ 1.3
CHGBP05060 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHGBP05060 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC23.16■■□□□ 1.3
CHGBP05060 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHGBP05060 INGX-201ENST00000359239 846 ntBASIC23.16■■□□□ 1.3
CHGBP05060 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC23.16■■□□□ 1.3
CHGBP05060 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC23.16■■□□□ 1.3
CHGBP05060 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC23.16■■□□□ 1.3
CHGBP05060 AP000692.2-201ENST00000608391 879 ntBASIC23.16■■□□□ 1.3
CHGBP05060 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
CHGBP05060 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CHGBP05060 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CHGBP05060 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CHGBP05060 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CHGBP05060 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHGBP05060 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC23.16■■□□□ 1.3
CHGBP05060 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CHGBP05060 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC23.15■■□□□ 1.3
CHGBP05060 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC23.15■■□□□ 1.3
CHGBP05060 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CHGBP05060 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
CHGBP05060 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC23.15■■□□□ 1.3
CHGBP05060 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CHGBP05060 DERL1-203ENST00000419562 918 ntTSL 2 BASIC23.15■■□□□ 1.3
CHGBP05060 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CHGBP05060 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC23.15■■□□□ 1.3
CHGBP05060 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms