Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LDLRP01130 AL355472.2-201ENST00000422958 438 ntBASIC18.58■□□□□ 0.56
LDLRP01130 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.58■□□□□ 0.56
LDLRP01130 PNMA6B-201ENST00000538162 1200 ntBASIC18.58■□□□□ 0.56
LDLRP01130 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.58■□□□□ 0.56
LDLRP01130 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.58■□□□□ 0.56
LDLRP01130 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LDLRP01130 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.58■□□□□ 0.56
LDLRP01130 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LDLRP01130 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LDLRP01130 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.57■□□□□ 0.56
LDLRP01130 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LDLRP01130 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
LDLRP01130 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LDLRP01130 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LDLRP01130 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LDLRP01130 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
LDLRP01130 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
LDLRP01130 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LDLRP01130 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.57■□□□□ 0.56
LDLRP01130 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LDLRP01130 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
LDLRP01130 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.57■□□□□ 0.56
LDLRP01130 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LDLRP01130 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LDLRP01130 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LDLRP01130 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
LDLRP01130 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LDLRP01130 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LDLRP01130 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LDLRP01130 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.57■□□□□ 0.56
LDLRP01130 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
LDLRP01130 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LDLRP01130 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.56■□□□□ 0.56
LDLRP01130 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
LDLRP01130 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LDLRP01130 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LDLRP01130 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LDLRP01130 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.56■□□□□ 0.56
LDLRP01130 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LDLRP01130 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LDLRP01130 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
LDLRP01130 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LDLRP01130 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.56■□□□□ 0.56
LDLRP01130 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.56■□□□□ 0.56
LDLRP01130 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LDLRP01130 AC233263.1-201ENST00000578059 224 ntBASIC18.56■□□□□ 0.56
LDLRP01130 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LDLRP01130 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LDLRP01130 FAM21FP-204ENST00000608637 956 ntBASIC18.56■□□□□ 0.56
LDLRP01130 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LDLRP01130 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LDLRP01130 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LDLRP01130 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LDLRP01130 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LDLRP01130 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LDLRP01130 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.56■□□□□ 0.56
LDLRP01130 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LDLRP01130 AC005082.1-201ENST00000413042 2259 ntBASIC18.56■□□□□ 0.56
LDLRP01130 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.56■□□□□ 0.56
LDLRP01130 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDLRP01130 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
LDLRP01130 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
LDLRP01130 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.55■□□□□ 0.56
LDLRP01130 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDLRP01130 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LDLRP01130 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDLRP01130 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDLRP01130 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDLRP01130 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.55■□□□□ 0.56
LDLRP01130 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LDLRP01130 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDLRP01130 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDLRP01130 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.55■□□□□ 0.56
LDLRP01130 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
LDLRP01130 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.55■□□□□ 0.56
LDLRP01130 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
LDLRP01130 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
LDLRP01130 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.55■□□□□ 0.56
LDLRP01130 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDLRP01130 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
LDLRP01130 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDLRP01130 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDLRP01130 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDLRP01130 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LDLRP01130 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LDLRP01130 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LDLRP01130 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LDLRP01130 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LDLRP01130 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.54■□□□□ 0.56
LDLRP01130 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.54■□□□□ 0.56
LDLRP01130 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.54■□□□□ 0.56
LDLRP01130 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.54■□□□□ 0.56
LDLRP01130 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LDLRP01130 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LDLRP01130 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
LDLRP01130 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
LDLRP01130 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.54■□□□□ 0.56
LDLRP01130 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LDLRP01130 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms