Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.41■□□□□ 0.7
PDGFBP01127 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFBP01127 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFBP01127 AC138894.3-201ENST00000603787 634 ntBASIC19.41■□□□□ 0.7
PDGFBP01127 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.41■□□□□ 0.7
PDGFBP01127 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.41■□□□□ 0.7
PDGFBP01127 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.41■□□□□ 0.7
PDGFBP01127 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFBP01127 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.41■□□□□ 0.7
PDGFBP01127 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
PDGFBP01127 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.4■□□□□ 0.7
PDGFBP01127 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.4■□□□□ 0.7
PDGFBP01127 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDGFBP01127 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDGFBP01127 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDGFBP01127 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDGFBP01127 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDGFBP01127 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.4■□□□□ 0.7
PDGFBP01127 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.4■□□□□ 0.7
PDGFBP01127 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.4■□□□□ 0.7
PDGFBP01127 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.4■□□□□ 0.7
PDGFBP01127 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.4■□□□□ 0.7
PDGFBP01127 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.4■□□□□ 0.7
PDGFBP01127 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.4■□□□□ 0.7
PDGFBP01127 AC012615.1-201ENST00000565797 1299 ntBASIC19.4■□□□□ 0.7
PDGFBP01127 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDGFBP01127 AL117328.2-201ENST00000624617 1940 ntBASIC19.4■□□□□ 0.7
PDGFBP01127 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDGFBP01127 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.4■□□□□ 0.7
PDGFBP01127 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.4■□□□□ 0.7
PDGFBP01127 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDGFBP01127 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDGFBP01127 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PDGFBP01127 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.39■□□□□ 0.69
PDGFBP01127 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.39■□□□□ 0.69
PDGFBP01127 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.39■□□□□ 0.69
PDGFBP01127 AC092865.5-201ENST00000545435 363 ntBASIC19.39■□□□□ 0.69
PDGFBP01127 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.39■□□□□ 0.69
PDGFBP01127 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.39■□□□□ 0.69
PDGFBP01127 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.39■□□□□ 0.69
PDGFBP01127 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDGFBP01127 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
PDGFBP01127 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDGFBP01127 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDGFBP01127 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDGFBP01127 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDGFBP01127 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDGFBP01127 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDGFBP01127 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDGFBP01127 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDGFBP01127 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.39■□□□□ 0.69
PDGFBP01127 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDGFBP01127 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDGFBP01127 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDGFBP01127 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDGFBP01127 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.38■□□□□ 0.69
PDGFBP01127 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDGFBP01127 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDGFBP01127 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDGFBP01127 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.38■□□□□ 0.69
PDGFBP01127 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDGFBP01127 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.38■□□□□ 0.69
PDGFBP01127 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PDGFBP01127 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.38■□□□□ 0.69
PDGFBP01127 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.38■□□□□ 0.69
PDGFBP01127 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDGFBP01127 SLC25A1P1-201ENST00000528351 927 ntBASIC19.38■□□□□ 0.69
PDGFBP01127 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
PDGFBP01127 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.38■□□□□ 0.69
PDGFBP01127 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
PDGFBP01127 RNF126P1-202ENST00000569893 925 ntBASIC19.38■□□□□ 0.69
PDGFBP01127 SMG8-203ENST00000578922 2178 ntBASIC19.38■□□□□ 0.69
PDGFBP01127 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PDGFBP01127 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.38■□□□□ 0.69
PDGFBP01127 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.38■□□□□ 0.69
PDGFBP01127 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.38■□□□□ 0.69
PDGFBP01127 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDGFBP01127 FBXW4P1-201ENST00000426721 2239 ntBASIC19.37■□□□□ 0.69
PDGFBP01127 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PDGFBP01127 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.37■□□□□ 0.69
PDGFBP01127 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.37■□□□□ 0.69
PDGFBP01127 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDGFBP01127 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDGFBP01127 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.37■□□□□ 0.69
PDGFBP01127 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PDGFBP01127 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDGFBP01127 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDGFBP01127 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDGFBP01127 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.37■□□□□ 0.69
PDGFBP01127 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.37■□□□□ 0.69
PDGFBP01127 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.37■□□□□ 0.69
PDGFBP01127 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.37■□□□□ 0.69
PDGFBP01127 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDGFBP01127 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDGFBP01127 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PDGFBP01127 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDGFBP01127 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.37■□□□□ 0.69
PDGFBP01127 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PDGFBP01127 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDGFBP01127 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms