Protein–RNA interactions for Protein: O95777

LSM8, U6 snRNA-associated Sm-like protein LSm8, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8O95777 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.34■□□□□ 0.85
LSM8O95777 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSM8O95777 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.34■□□□□ 0.85
LSM8O95777 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSM8O95777 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.34■□□□□ 0.85
LSM8O95777 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.34■□□□□ 0.85
LSM8O95777 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LSM8O95777 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.33■□□□□ 0.85
LSM8O95777 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LSM8O95777 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LSM8O95777 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
LSM8O95777 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LSM8O95777 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
LSM8O95777 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LSM8O95777 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
LSM8O95777 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
LSM8O95777 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
LSM8O95777 PRORSD1P-201ENST00000295112 541 ntBASIC20.33■□□□□ 0.85
LSM8O95777 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LSM8O95777 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LSM8O95777 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LSM8O95777 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LSM8O95777 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
LSM8O95777 KSR1P1-201ENST00000446298 240 ntBASIC20.33■□□□□ 0.85
LSM8O95777 AP002982.1-201ENST00000492365 877 ntBASIC20.33■□□□□ 0.85
LSM8O95777 Z85996.1-201ENST00000494644 937 ntBASIC20.33■□□□□ 0.85
LSM8O95777 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.33■□□□□ 0.85
LSM8O95777 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.33■□□□□ 0.85
LSM8O95777 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.33■□□□□ 0.85
LSM8O95777 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LSM8O95777 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
LSM8O95777 FP475955.4-201ENST00000623131 1990 ntBASIC20.33■□□□□ 0.84
LSM8O95777 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
LSM8O95777 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LSM8O95777 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
LSM8O95777 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.84
LSM8O95777 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LSM8O95777 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
LSM8O95777 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
LSM8O95777 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LSM8O95777 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LSM8O95777 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
LSM8O95777 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.32■□□□□ 0.84
LSM8O95777 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
LSM8O95777 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
LSM8O95777 IRX1P1-201ENST00000438849 1838 ntBASIC20.32■□□□□ 0.84
LSM8O95777 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
LSM8O95777 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.32■□□□□ 0.84
LSM8O95777 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LSM8O95777 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
LSM8O95777 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.32■□□□□ 0.84
LSM8O95777 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LSM8O95777 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LSM8O95777 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
LSM8O95777 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.32■□□□□ 0.84
LSM8O95777 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LSM8O95777 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LSM8O95777 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.32■□□□□ 0.84
LSM8O95777 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LSM8O95777 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
LSM8O95777 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LSM8O95777 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
LSM8O95777 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LSM8O95777 KRT8P41-201ENST00000533985 1514 ntBASIC20.32■□□□□ 0.84
LSM8O95777 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LSM8O95777 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.32■□□□□ 0.84
LSM8O95777 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.32■□□□□ 0.84
LSM8O95777 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSM8O95777 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
LSM8O95777 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.31■□□□□ 0.84
LSM8O95777 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSM8O95777 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSM8O95777 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
LSM8O95777 AC098818.2-201ENST00000564925 2320 ntBASIC20.31■□□□□ 0.84
LSM8O95777 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSM8O95777 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSM8O95777 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
LSM8O95777 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSM8O95777 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.31■□□□□ 0.84
LSM8O95777 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.31■□□□□ 0.84
LSM8O95777 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSM8O95777 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSM8O95777 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSM8O95777 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSM8O95777 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LSM8O95777 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.31■□□□□ 0.84
LSM8O95777 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
LSM8O95777 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.31■□□□□ 0.84
LSM8O95777 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
LSM8O95777 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.31■□□□□ 0.84
LSM8O95777 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.31■□□□□ 0.84
LSM8O95777 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.31■□□□□ 0.84
LSM8O95777 FAM197Y4-202ENST00000622692 608 ntBASIC20.31■□□□□ 0.84
LSM8O95777 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.31■□□□□ 0.84
LSM8O95777 AC131212.4-201ENST00000623606 975 ntBASIC20.31■□□□□ 0.84
LSM8O95777 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSM8O95777 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LSM8O95777 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LSM8O95777 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.31■□□□□ 0.84
LSM8O95777 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms