Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE6O95741 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE6O95741 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE6O95741 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE6O95741 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE6O95741 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE6O95741 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE6O95741 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.91■□□□□ 0.62
CPNE6O95741 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.91■□□□□ 0.62
CPNE6O95741 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.91■□□□□ 0.62
CPNE6O95741 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.91■□□□□ 0.62
CPNE6O95741 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE6O95741 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.91■□□□□ 0.62
CPNE6O95741 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.91■□□□□ 0.62
CPNE6O95741 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.91■□□□□ 0.62
CPNE6O95741 AC092865.7-201ENST00000641832 219 ntBASIC18.91■□□□□ 0.62
CPNE6O95741 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE6O95741 KRT18P22-201ENST00000402024 1347 ntBASIC18.91■□□□□ 0.62
CPNE6O95741 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE6O95741 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.91■□□□□ 0.62
CPNE6O95741 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.91■□□□□ 0.62
CPNE6O95741 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CPNE6O95741 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.91■□□□□ 0.62
CPNE6O95741 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE6O95741 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.91■□□□□ 0.62
CPNE6O95741 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE6O95741 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.91■□□□□ 0.62
CPNE6O95741 AC004408.2-201ENST00000623613 2777 ntBASIC18.91■□□□□ 0.62
CPNE6O95741 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE6O95741 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE6O95741 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE6O95741 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE6O95741 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.9■□□□□ 0.62
CPNE6O95741 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE6O95741 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE6O95741 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE6O95741 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.9■□□□□ 0.62
CPNE6O95741 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE6O95741 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.9■□□□□ 0.62
CPNE6O95741 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.9■□□□□ 0.62
CPNE6O95741 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.9■□□□□ 0.62
CPNE6O95741 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CPNE6O95741 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE6O95741 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CPNE6O95741 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CPNE6O95741 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE6O95741 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE6O95741 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.9■□□□□ 0.62
CPNE6O95741 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.9■□□□□ 0.62
CPNE6O95741 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE6O95741 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE6O95741 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE6O95741 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE6O95741 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.9■□□□□ 0.62
CPNE6O95741 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE6O95741 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE6O95741 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
CPNE6O95741 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.89■□□□□ 0.61
CPNE6O95741 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.89■□□□□ 0.61
CPNE6O95741 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.89■□□□□ 0.61
CPNE6O95741 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPNE6O95741 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.89■□□□□ 0.61
CPNE6O95741 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.89■□□□□ 0.61
CPNE6O95741 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.89■□□□□ 0.61
CPNE6O95741 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CPNE6O95741 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.89■□□□□ 0.61
CPNE6O95741 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.89■□□□□ 0.61
CPNE6O95741 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.89■□□□□ 0.61
CPNE6O95741 DGCR10-201ENST00000609839 495 ntBASIC18.89■□□□□ 0.61
CPNE6O95741 AC131212.4-201ENST00000623606 975 ntBASIC18.89■□□□□ 0.61
CPNE6O95741 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.89■□□□□ 0.61
CPNE6O95741 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.89■□□□□ 0.61
CPNE6O95741 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.89■□□□□ 0.61
CPNE6O95741 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CPNE6O95741 LETM1P2-201ENST00000597330 2178 ntBASIC18.89■□□□□ 0.61
CPNE6O95741 CYP2D8P-201ENST00000433633 1490 ntBASIC18.89■□□□□ 0.61
CPNE6O95741 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.89■□□□□ 0.61
CPNE6O95741 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE6O95741 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CPNE6O95741 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.88■□□□□ 0.61
CPNE6O95741 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE6O95741 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE6O95741 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE6O95741 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CPNE6O95741 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE6O95741 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.88■□□□□ 0.61
CPNE6O95741 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
CPNE6O95741 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.88■□□□□ 0.61
CPNE6O95741 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.88■□□□□ 0.61
CPNE6O95741 AC010947.1-201ENST00000623454 693 ntBASIC18.88■□□□□ 0.61
CPNE6O95741 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE6O95741 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.88■□□□□ 0.61
CPNE6O95741 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CPNE6O95741 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE6O95741 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE6O95741 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE6O95741 TCF3P1-201ENST00000423021 1937 ntBASIC18.88■□□□□ 0.61
CPNE6O95741 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CPNE6O95741 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE6O95741 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms