Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
NKX2-2O95096 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.79■□□□□ 0.44
NKX2-2O95096 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NKX2-2O95096 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NKX2-2O95096 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NKX2-2O95096 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NKX2-2O95096 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NKX2-2O95096 KRT8P41-201ENST00000533985 1514 ntBASIC17.79■□□□□ 0.44
NKX2-2O95096 AL161938.1-201ENST00000569833 2180 ntBASIC17.79■□□□□ 0.44
NKX2-2O95096 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
NKX2-2O95096 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NKX2-2O95096 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NKX2-2O95096 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.79■□□□□ 0.44
NKX2-2O95096 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NKX2-2O95096 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NKX2-2O95096 AC004980.1-204ENST00000429707 299 ntBASIC17.79■□□□□ 0.44
NKX2-2O95096 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.79■□□□□ 0.44
NKX2-2O95096 TSPY21P-201ENST00000433481 731 ntBASIC17.79■□□□□ 0.44
NKX2-2O95096 RPS2P4-201ENST00000476944 856 ntBASIC17.79■□□□□ 0.44
NKX2-2O95096 Z85996.1-201ENST00000494644 937 ntBASIC17.79■□□□□ 0.44
NKX2-2O95096 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.79■□□□□ 0.44
NKX2-2O95096 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NKX2-2O95096 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
NKX2-2O95096 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.79■□□□□ 0.44
NKX2-2O95096 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.79■□□□□ 0.44
NKX2-2O95096 AC131212.4-201ENST00000623606 975 ntBASIC17.79■□□□□ 0.44
NKX2-2O95096 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NKX2-2O95096 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NKX2-2O95096 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NKX2-2O95096 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.79■□□□□ 0.44
NKX2-2O95096 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NKX2-2O95096 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NKX2-2O95096 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
NKX2-2O95096 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
NKX2-2O95096 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
NKX2-2O95096 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
NKX2-2O95096 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NKX2-2O95096 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NKX2-2O95096 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NKX2-2O95096 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.79■□□□□ 0.44
NKX2-2O95096 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NKX2-2O95096 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.78■□□□□ 0.44
NKX2-2O95096 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.78■□□□□ 0.44
NKX2-2O95096 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.78■□□□□ 0.44
NKX2-2O95096 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
NKX2-2O95096 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
NKX2-2O95096 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.78■□□□□ 0.44
NKX2-2O95096 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
NKX2-2O95096 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NKX2-2O95096 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NKX2-2O95096 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.78■□□□□ 0.44
NKX2-2O95096 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NKX2-2O95096 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NKX2-2O95096 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
NKX2-2O95096 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.78■□□□□ 0.44
NKX2-2O95096 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NKX2-2O95096 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NKX2-2O95096 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
NKX2-2O95096 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NKX2-2O95096 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.78■□□□□ 0.44
NKX2-2O95096 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.78■□□□□ 0.44
NKX2-2O95096 AF186192.3-201ENST00000583427 947 ntBASIC17.78■□□□□ 0.44
NKX2-2O95096 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NKX2-2O95096 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NKX2-2O95096 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NKX2-2O95096 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
NKX2-2O95096 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NKX2-2O95096 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NKX2-2O95096 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NKX2-2O95096 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.77■□□□□ 0.44
NKX2-2O95096 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
NKX2-2O95096 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NKX2-2O95096 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NKX2-2O95096 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.77■□□□□ 0.44
NKX2-2O95096 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.77■□□□□ 0.44
NKX2-2O95096 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NKX2-2O95096 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.77■□□□□ 0.44
NKX2-2O95096 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
NKX2-2O95096 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
NKX2-2O95096 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
NKX2-2O95096 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NKX2-2O95096 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NKX2-2O95096 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NKX2-2O95096 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NKX2-2O95096 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
NKX2-2O95096 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NKX2-2O95096 UBE2SP1-201ENST00000450587 669 ntBASIC17.77■□□□□ 0.44
NKX2-2O95096 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.77■□□□□ 0.44
NKX2-2O95096 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.77■□□□□ 0.44
NKX2-2O95096 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NKX2-2O95096 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.77■□□□□ 0.44
NKX2-2O95096 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.77■□□□□ 0.44
NKX2-2O95096 AC073195.1-201ENST00000607241 877 ntBASIC17.77■□□□□ 0.44
NKX2-2O95096 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
NKX2-2O95096 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NKX2-2O95096 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.77■□□□□ 0.43
NKX2-2O95096 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.77■□□□□ 0.43
NKX2-2O95096 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
NKX2-2O95096 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NKX2-2O95096 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms