Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC12.99□□□□□ -0.33
SNCGO76070 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SNCGO76070 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SNCGO76070 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SNCGO76070 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SNCGO76070 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SNCGO76070 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC12.99□□□□□ -0.33
SNCGO76070 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SNCGO76070 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SNCGO76070 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SNCGO76070 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SNCGO76070 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SNCGO76070 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SNCGO76070 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SNCGO76070 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SNCGO76070 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SNCGO76070 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCGO76070 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCGO76070 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SNCGO76070 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCGO76070 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCGO76070 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCGO76070 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCGO76070 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC12.98□□□□□ -0.33
SNCGO76070 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
SNCGO76070 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
SNCGO76070 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCGO76070 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC12.98□□□□□ -0.33
SNCGO76070 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC12.98□□□□□ -0.33
SNCGO76070 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCGO76070 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCGO76070 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCGO76070 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
SNCGO76070 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC12.98□□□□□ -0.33
SNCGO76070 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCGO76070 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCGO76070 AC068880.1-201ENST00000507289 2297 ntBASIC12.98□□□□□ -0.33
SNCGO76070 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCGO76070 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SNCGO76070 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCGO76070 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
SNCGO76070 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCGO76070 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCGO76070 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC12.98□□□□□ -0.33
SNCGO76070 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCGO76070 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
SNCGO76070 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCGO76070 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCGO76070 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC12.98□□□□□ -0.33
SNCGO76070 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCGO76070 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCGO76070 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCGO76070 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCGO76070 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC12.98□□□□□ -0.33
SNCGO76070 GATM-206ENST00000558336 1522 ntTSL 2 BASIC12.98□□□□□ -0.33
SNCGO76070 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SNCGO76070 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
SNCGO76070 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SNCGO76070 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNCGO76070 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC12.97□□□□□ -0.33
SNCGO76070 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNCGO76070 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNCGO76070 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNCGO76070 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SNCGO76070 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SNCGO76070 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNCGO76070 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNCGO76070 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
SNCGO76070 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNCGO76070 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC12.97□□□□□ -0.33
SNCGO76070 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNCGO76070 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNCGO76070 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC12.97□□□□□ -0.33
SNCGO76070 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNCGO76070 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNCGO76070 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNCGO76070 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC12.97□□□□□ -0.33
SNCGO76070 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNCGO76070 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SNCGO76070 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC12.97□□□□□ -0.33
SNCGO76070 CLTA-210ENST00000540080 989 ntTSL 2 BASIC12.97□□□□□ -0.33
SNCGO76070 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNCGO76070 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC12.97□□□□□ -0.33
SNCGO76070 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SNCGO76070 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNCGO76070 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNCGO76070 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SNCGO76070 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC12.97□□□□□ -0.33
SNCGO76070 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.97□□□□□ -0.33
SNCGO76070 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SNCGO76070 AC133637.1-201ENST00000624115 1537 ntBASIC12.97□□□□□ -0.33
SNCGO76070 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNCGO76070 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SNCGO76070 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
SNCGO76070 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SNCGO76070 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SNCGO76070 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SNCGO76070 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SNCGO76070 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SNCGO76070 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms