Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HCN1O60741 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HCN1O60741 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18■□□□□ 0.47
HCN1O60741 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
HCN1O60741 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HCN1O60741 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.99■□□□□ 0.47
HCN1O60741 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
HCN1O60741 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HCN1O60741 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.99■□□□□ 0.47
HCN1O60741 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HCN1O60741 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
HCN1O60741 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.99■□□□□ 0.47
HCN1O60741 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.99■□□□□ 0.47
HCN1O60741 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.99■□□□□ 0.47
HCN1O60741 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.99■□□□□ 0.47
HCN1O60741 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HCN1O60741 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HCN1O60741 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HCN1O60741 AC004408.2-201ENST00000623613 2777 ntBASIC17.99■□□□□ 0.47
HCN1O60741 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
HCN1O60741 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HCN1O60741 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HCN1O60741 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.98■□□□□ 0.47
HCN1O60741 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HCN1O60741 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HCN1O60741 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HCN1O60741 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HCN1O60741 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
HCN1O60741 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HCN1O60741 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HCN1O60741 AC124283.5-201ENST00000624661 1809 ntBASIC17.98■□□□□ 0.47
HCN1O60741 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.98■□□□□ 0.47
HCN1O60741 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HCN1O60741 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HCN1O60741 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
HCN1O60741 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HCN1O60741 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HCN1O60741 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HCN1O60741 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.98■□□□□ 0.47
HCN1O60741 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HCN1O60741 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HCN1O60741 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.98■□□□□ 0.47
HCN1O60741 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HCN1O60741 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.98■□□□□ 0.47
HCN1O60741 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.98■□□□□ 0.47
HCN1O60741 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
HCN1O60741 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.98■□□□□ 0.47
HCN1O60741 NBPF21P-201ENST00000425093 1451 ntBASIC17.98■□□□□ 0.47
HCN1O60741 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HCN1O60741 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HCN1O60741 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
HCN1O60741 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.98■□□□□ 0.47
HCN1O60741 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HCN1O60741 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
HCN1O60741 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
HCN1O60741 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.98■□□□□ 0.47
HCN1O60741 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HCN1O60741 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.98■□□□□ 0.47
HCN1O60741 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HCN1O60741 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HCN1O60741 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HCN1O60741 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HCN1O60741 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.97■□□□□ 0.47
HCN1O60741 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HCN1O60741 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.97■□□□□ 0.47
HCN1O60741 AP001271.2-201ENST00000624018 1556 ntBASIC17.97■□□□□ 0.47
HCN1O60741 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HCN1O60741 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HCN1O60741 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HCN1O60741 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
HCN1O60741 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HCN1O60741 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HCN1O60741 KRT16P5-201ENST00000455284 522 ntBASIC17.97■□□□□ 0.47
HCN1O60741 SNORA78-201ENST00000459373 127 ntBASIC17.97■□□□□ 0.47
HCN1O60741 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
HCN1O60741 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HCN1O60741 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.97■□□□□ 0.47
HCN1O60741 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HCN1O60741 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.97■□□□□ 0.47
HCN1O60741 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.97■□□□□ 0.47
HCN1O60741 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HCN1O60741 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.97■□□□□ 0.47
HCN1O60741 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.97■□□□□ 0.47
HCN1O60741 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
HCN1O60741 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.97■□□□□ 0.47
HCN1O60741 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HCN1O60741 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HCN1O60741 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HCN1O60741 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HCN1O60741 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HCN1O60741 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HCN1O60741 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
HCN1O60741 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
HCN1O60741 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HCN1O60741 AC005332.7-201ENST00000614046 2005 ntBASIC17.96■□□□□ 0.47
HCN1O60741 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
HCN1O60741 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
HCN1O60741 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
HCN1O60741 LETM1P2-201ENST00000597330 2178 ntBASIC17.96■□□□□ 0.47
HCN1O60741 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms