Protein–RNA interactions for Protein: O15499

GSC2, Homeobox protein goosecoid-2, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSC2O15499 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GSC2O15499 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
GSC2O15499 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GSC2O15499 IRS3P-201ENST00000223076 1006 ntBASIC18.54■□□□□ 0.56
GSC2O15499 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GSC2O15499 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.54■□□□□ 0.56
GSC2O15499 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
GSC2O15499 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.54■□□□□ 0.56
GSC2O15499 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GSC2O15499 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GSC2O15499 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.54■□□□□ 0.56
GSC2O15499 AC131212.1-201ENST00000613771 668 ntBASIC18.54■□□□□ 0.56
GSC2O15499 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.54■□□□□ 0.56
GSC2O15499 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
GSC2O15499 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
GSC2O15499 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
GSC2O15499 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
GSC2O15499 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GSC2O15499 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.54■□□□□ 0.56
GSC2O15499 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GSC2O15499 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GSC2O15499 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GSC2O15499 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GSC2O15499 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GSC2O15499 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.53■□□□□ 0.56
GSC2O15499 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
GSC2O15499 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GSC2O15499 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.53■□□□□ 0.56
GSC2O15499 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
GSC2O15499 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.53■□□□□ 0.56
GSC2O15499 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
GSC2O15499 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
GSC2O15499 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GSC2O15499 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.53■□□□□ 0.56
GSC2O15499 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GSC2O15499 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.53■□□□□ 0.56
GSC2O15499 SLC7A5P1-201ENST00000568957 537 ntBASIC18.53■□□□□ 0.56
GSC2O15499 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GSC2O15499 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.53■□□□□ 0.56
GSC2O15499 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GSC2O15499 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
GSC2O15499 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GSC2O15499 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
GSC2O15499 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GSC2O15499 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GSC2O15499 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.53■□□□□ 0.56
GSC2O15499 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GSC2O15499 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GSC2O15499 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
GSC2O15499 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GSC2O15499 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.52■□□□□ 0.56
GSC2O15499 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
GSC2O15499 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GSC2O15499 AC135279.3-201ENST00000610945 1311 ntBASIC18.52■□□□□ 0.56
GSC2O15499 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GSC2O15499 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
GSC2O15499 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GSC2O15499 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
GSC2O15499 HLA-G-202ENST00000376815 851 ntBASIC18.52■□□□□ 0.56
GSC2O15499 HLA-G-203ENST00000376818 1127 ntBASIC18.52■□□□□ 0.56
GSC2O15499 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GSC2O15499 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.52■□□□□ 0.56
GSC2O15499 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.52■□□□□ 0.56
GSC2O15499 AL354811.1-201ENST00000610286 706 ntBASIC18.52■□□□□ 0.56
GSC2O15499 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GSC2O15499 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
GSC2O15499 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GSC2O15499 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
GSC2O15499 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
GSC2O15499 AC106820.2-201ENST00000563775 3264 ntBASIC18.52■□□□□ 0.55
GSC2O15499 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
GSC2O15499 AC009053.2-201ENST00000563701 2365 ntBASIC18.52■□□□□ 0.55
GSC2O15499 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
GSC2O15499 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.52■□□□□ 0.55
GSC2O15499 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
GSC2O15499 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
GSC2O15499 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.51■□□□□ 0.55
GSC2O15499 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GSC2O15499 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GSC2O15499 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
GSC2O15499 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GSC2O15499 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GSC2O15499 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GSC2O15499 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.51■□□□□ 0.55
GSC2O15499 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GSC2O15499 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.51■□□□□ 0.55
GSC2O15499 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GSC2O15499 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GSC2O15499 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.51■□□□□ 0.55
GSC2O15499 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.51■□□□□ 0.55
GSC2O15499 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.51■□□□□ 0.55
GSC2O15499 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GSC2O15499 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GSC2O15499 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.51■□□□□ 0.55
GSC2O15499 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GSC2O15499 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
GSC2O15499 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.51■□□□□ 0.55
GSC2O15499 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.51■□□□□ 0.55
GSC2O15499 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.51■□□□□ 0.55
GSC2O15499 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms