Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DFFAO00273 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DFFAO00273 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
DFFAO00273 RARRES2P10-201ENST00000564312 460 ntBASIC19.82■□□□□ 0.76
DFFAO00273 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.82■□□□□ 0.76
DFFAO00273 AL032819.2-201ENST00000624543 2162 ntBASIC19.82■□□□□ 0.76
DFFAO00273 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.82■□□□□ 0.76
DFFAO00273 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.82■□□□□ 0.76
DFFAO00273 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
DFFAO00273 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.82■□□□□ 0.76
DFFAO00273 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DFFAO00273 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
DFFAO00273 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DFFAO00273 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
DFFAO00273 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DFFAO00273 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.81■□□□□ 0.76
DFFAO00273 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DFFAO00273 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.81■□□□□ 0.76
DFFAO00273 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DFFAO00273 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DFFAO00273 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
DFFAO00273 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DFFAO00273 NIFKP9-201ENST00000419265 221 ntBASIC19.81■□□□□ 0.76
DFFAO00273 AL353807.1-201ENST00000427475 662 ntBASIC19.81■□□□□ 0.76
DFFAO00273 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
DFFAO00273 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DFFAO00273 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.81■□□□□ 0.76
DFFAO00273 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.81■□□□□ 0.76
DFFAO00273 AF186192.3-201ENST00000583427 947 ntBASIC19.81■□□□□ 0.76
DFFAO00273 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
DFFAO00273 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.81■□□□□ 0.76
DFFAO00273 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.81■□□□□ 0.76
DFFAO00273 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.81■□□□□ 0.76
DFFAO00273 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DFFAO00273 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.81■□□□□ 0.76
DFFAO00273 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.8■□□□□ 0.76
DFFAO00273 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.8■□□□□ 0.76
DFFAO00273 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.8■□□□□ 0.76
DFFAO00273 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
DFFAO00273 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.8■□□□□ 0.76
DFFAO00273 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.8■□□□□ 0.76
DFFAO00273 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
DFFAO00273 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DFFAO00273 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.8■□□□□ 0.76
DFFAO00273 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DFFAO00273 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DFFAO00273 RPS2P4-201ENST00000476944 856 ntBASIC19.8■□□□□ 0.76
DFFAO00273 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.8■□□□□ 0.76
DFFAO00273 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.8■□□□□ 0.76
DFFAO00273 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
DFFAO00273 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.8■□□□□ 0.76
DFFAO00273 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DFFAO00273 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.8■□□□□ 0.76
DFFAO00273 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.8■□□□□ 0.76
DFFAO00273 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
DFFAO00273 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DFFAO00273 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DFFAO00273 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DFFAO00273 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
DFFAO00273 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.79■□□□□ 0.76
DFFAO00273 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DFFAO00273 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.79■□□□□ 0.76
DFFAO00273 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DFFAO00273 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
DFFAO00273 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DFFAO00273 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
DFFAO00273 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
DFFAO00273 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
DFFAO00273 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DFFAO00273 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.79■□□□□ 0.76
DFFAO00273 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DFFAO00273 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.79■□□□□ 0.76
DFFAO00273 AL160286.2-201ENST00000567150 934 ntBASIC19.79■□□□□ 0.76
DFFAO00273 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.79■□□□□ 0.76
DFFAO00273 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.79■□□□□ 0.76
DFFAO00273 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.79■□□□□ 0.76
DFFAO00273 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.79■□□□□ 0.76
DFFAO00273 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
DFFAO00273 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.79■□□□□ 0.76
DFFAO00273 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DFFAO00273 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.79■□□□□ 0.76
DFFAO00273 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DFFAO00273 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DFFAO00273 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DFFAO00273 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DFFAO00273 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
DFFAO00273 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DFFAO00273 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
DFFAO00273 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.78■□□□□ 0.76
DFFAO00273 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
DFFAO00273 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
DFFAO00273 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
DFFAO00273 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
DFFAO00273 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
DFFAO00273 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
DFFAO00273 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
DFFAO00273 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DFFAO00273 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
DFFAO00273 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
DFFAO00273 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms