Protein–RNA interactions for Protein: A6NKG5

RTL1, Retrotransposon-like protein 1, humanhuman

Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1A6NKG5 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
RTL1A6NKG5 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC25.61■■□□□ 1.69
RTL1A6NKG5 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RTL1A6NKG5 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC25.61■■□□□ 1.69
RTL1A6NKG5 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC25.61■■□□□ 1.69
RTL1A6NKG5 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RTL1A6NKG5 AC116407.4-201ENST00000623319 1061 ntBASIC25.61■■□□□ 1.69
RTL1A6NKG5 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RTL1A6NKG5 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
RTL1A6NKG5 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC25.61■■□□□ 1.69
RTL1A6NKG5 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
RTL1A6NKG5 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
RTL1A6NKG5 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RTL1A6NKG5 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC25.6■■□□□ 1.69
RTL1A6NKG5 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC25.6■■□□□ 1.69
RTL1A6NKG5 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
RTL1A6NKG5 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
RTL1A6NKG5 STARP1-201ENST00000397973 869 ntBASIC25.6■■□□□ 1.69
RTL1A6NKG5 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RTL1A6NKG5 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC25.6■■□□□ 1.69
RTL1A6NKG5 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC25.6■■□□□ 1.69
RTL1A6NKG5 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC25.6■■□□□ 1.69
RTL1A6NKG5 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC25.6■■□□□ 1.69
RTL1A6NKG5 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC25.6■■□□□ 1.69
RTL1A6NKG5 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
RTL1A6NKG5 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RTL1A6NKG5 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC25.6■■□□□ 1.69
RTL1A6NKG5 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RTL1A6NKG5 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC25.6■■□□□ 1.69
RTL1A6NKG5 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RTL1A6NKG5 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RTL1A6NKG5 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
RTL1A6NKG5 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC25.6■■□□□ 1.69
RTL1A6NKG5 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RTL1A6NKG5 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC25.59■■□□□ 1.69
RTL1A6NKG5 BUB3-202ENST00000368859 667 ntTSL 3 BASIC25.59■■□□□ 1.69
RTL1A6NKG5 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RTL1A6NKG5 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RTL1A6NKG5 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC25.59■■□□□ 1.69
RTL1A6NKG5 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RTL1A6NKG5 CD81-212ENST00000526072 1172 ntTSL 5 BASIC25.59■■□□□ 1.69
RTL1A6NKG5 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RTL1A6NKG5 AL391422.3-201ENST00000603791 2761 ntBASIC25.59■■□□□ 1.69
RTL1A6NKG5 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RTL1A6NKG5 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
RTL1A6NKG5 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RTL1A6NKG5 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC25.59■■□□□ 1.69
RTL1A6NKG5 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
RTL1A6NKG5 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC25.59■■□□□ 1.69
RTL1A6NKG5 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RTL1A6NKG5 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC25.59■■□□□ 1.69
RTL1A6NKG5 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RTL1A6NKG5 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
RTL1A6NKG5 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RTL1A6NKG5 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RTL1A6NKG5 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
RTL1A6NKG5 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC25.58■■□□□ 1.69
RTL1A6NKG5 SPDYE15P-201ENST00000424157 909 ntBASIC25.58■■□□□ 1.69
RTL1A6NKG5 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC25.58■■□□□ 1.69
RTL1A6NKG5 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC25.58■■□□□ 1.69
RTL1A6NKG5 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC25.58■■□□□ 1.69
RTL1A6NKG5 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RTL1A6NKG5 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RTL1A6NKG5 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC25.58■■□□□ 1.69
RTL1A6NKG5 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
RTL1A6NKG5 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC25.57■■□□□ 1.68
RTL1A6NKG5 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RTL1A6NKG5 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
RTL1A6NKG5 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RTL1A6NKG5 SNX5-210ENST00000481323 562 ntTSL 3 BASIC25.57■■□□□ 1.68
RTL1A6NKG5 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC25.57■■□□□ 1.68
RTL1A6NKG5 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC25.57■■□□□ 1.68
RTL1A6NKG5 AC140113.3-201ENST00000605663 199 ntBASIC25.57■■□□□ 1.68
RTL1A6NKG5 HYMAI.1-201ENST00000620949 238 ntBASIC25.57■■□□□ 1.68
RTL1A6NKG5 CR769767.2-201ENST00000622735 460 ntBASIC25.57■■□□□ 1.68
RTL1A6NKG5 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC25.57■■□□□ 1.68
RTL1A6NKG5 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
RTL1A6NKG5 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RTL1A6NKG5 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RTL1A6NKG5 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RTL1A6NKG5 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
RTL1A6NKG5 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RTL1A6NKG5 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC25.57■■□□□ 1.68
RTL1A6NKG5 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
RTL1A6NKG5 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC25.56■■□□□ 1.68
RTL1A6NKG5 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
RTL1A6NKG5 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
RTL1A6NKG5 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RTL1A6NKG5 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
RTL1A6NKG5 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RTL1A6NKG5 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RTL1A6NKG5 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC25.56■■□□□ 1.68
RTL1A6NKG5 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC25.56■■□□□ 1.68
RTL1A6NKG5 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RTL1A6NKG5 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC25.56■■□□□ 1.68
RTL1A6NKG5 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC25.56■■□□□ 1.68
RTL1A6NKG5 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC25.56■■□□□ 1.68
RTL1A6NKG5 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RTL1A6NKG5 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC25.56■■□□□ 1.68
RTL1A6NKG5 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC25.56■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms