Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC66A2RUB6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC66A2RUB6 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC66A2RUB6 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC66A2RUB6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC66A2RUB6 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC66A2RUB6 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC66A2RUB6 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CCDC66A2RUB6 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC66A2RUB6 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC66A2RUB6 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC66A2RUB6 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CCDC66A2RUB6 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC66A2RUB6 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC66A2RUB6 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC66A2RUB6 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC66A2RUB6 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC66A2RUB6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC66A2RUB6 HLA-G-202ENST00000376815 851 ntBASIC20.8■□□□□ 0.92
CCDC66A2RUB6 HLA-G-203ENST00000376818 1127 ntBASIC20.8■□□□□ 0.92
CCDC66A2RUB6 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.8■□□□□ 0.92
CCDC66A2RUB6 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.8■□□□□ 0.92
CCDC66A2RUB6 AC006015.1-201ENST00000429970 570 ntBASIC20.8■□□□□ 0.92
CCDC66A2RUB6 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.8■□□□□ 0.92
CCDC66A2RUB6 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC66A2RUB6 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC66A2RUB6 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.8■□□□□ 0.92
CCDC66A2RUB6 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC66A2RUB6 AC069236.1-201ENST00000604339 616 ntBASIC20.8■□□□□ 0.92
CCDC66A2RUB6 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC66A2RUB6 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.8■□□□□ 0.92
CCDC66A2RUB6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC66A2RUB6 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CCDC66A2RUB6 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CCDC66A2RUB6 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CCDC66A2RUB6 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC66A2RUB6 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC66A2RUB6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC66A2RUB6 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC66A2RUB6 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC66A2RUB6 HTR7P1-202ENST00000624664 4411 ntBASIC20.79■□□□□ 0.92
CCDC66A2RUB6 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CCDC66A2RUB6 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC66A2RUB6 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC66A2RUB6 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CCDC66A2RUB6 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC66A2RUB6 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
CCDC66A2RUB6 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC66A2RUB6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC66A2RUB6 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC66A2RUB6 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC66A2RUB6 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.79■□□□□ 0.92
CCDC66A2RUB6 AC011767.1-201ENST00000617410 1153 ntBASIC20.79■□□□□ 0.92
CCDC66A2RUB6 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC66A2RUB6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC66A2RUB6 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC66A2RUB6 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC66A2RUB6 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC66A2RUB6 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC66A2RUB6 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC66A2RUB6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC66A2RUB6 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC66A2RUB6 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC66A2RUB6 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CCDC66A2RUB6 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC66A2RUB6 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC66A2RUB6 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC66A2RUB6 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC66A2RUB6 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC66A2RUB6 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC66A2RUB6 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC66A2RUB6 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC66A2RUB6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CCDC66A2RUB6 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC66A2RUB6 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC66A2RUB6 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC66A2RUB6 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CCDC66A2RUB6 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC66A2RUB6 CYP2T1P-201ENST00000432607 1285 ntBASIC20.78■□□□□ 0.92
CCDC66A2RUB6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC66A2RUB6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC66A2RUB6 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.78■□□□□ 0.92
CCDC66A2RUB6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC66A2RUB6 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC66A2RUB6 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC66A2RUB6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC66A2RUB6 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC20.78■□□□□ 0.92
CCDC66A2RUB6 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC66A2RUB6 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC66A2RUB6 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC66A2RUB6 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC66A2RUB6 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC66A2RUB6 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC66A2RUB6 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CCDC66A2RUB6 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC66A2RUB6 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC20.77■□□□□ 0.92
CCDC66A2RUB6 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC66A2RUB6 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
CCDC66A2RUB6 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC66A2RUB6 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms