Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHISA3A0PJX4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHISA3A0PJX4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHISA3A0PJX4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHISA3A0PJX4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SHISA3A0PJX4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHISA3A0PJX4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHISA3A0PJX4 TFP1-202ENST00000475455 1573 ntBASIC16.81■□□□□ 0.28
SHISA3A0PJX4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHISA3A0PJX4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHISA3A0PJX4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SHISA3A0PJX4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHISA3A0PJX4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHISA3A0PJX4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.81■□□□□ 0.28
SHISA3A0PJX4 MIR935-201ENST00000401179 91 ntBASIC16.81■□□□□ 0.28
SHISA3A0PJX4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC16.81■□□□□ 0.28
SHISA3A0PJX4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.81■□□□□ 0.28
SHISA3A0PJX4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.81■□□□□ 0.28
SHISA3A0PJX4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.81■□□□□ 0.28
SHISA3A0PJX4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.81■□□□□ 0.28
SHISA3A0PJX4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.81■□□□□ 0.28
SHISA3A0PJX4 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.81■□□□□ 0.28
SHISA3A0PJX4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHISA3A0PJX4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHISA3A0PJX4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SHISA3A0PJX4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.81■□□□□ 0.28
SHISA3A0PJX4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.81■□□□□ 0.28
SHISA3A0PJX4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHISA3A0PJX4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHISA3A0PJX4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHISA3A0PJX4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHISA3A0PJX4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHISA3A0PJX4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.8■□□□□ 0.28
SHISA3A0PJX4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.8■□□□□ 0.28
SHISA3A0PJX4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.8■□□□□ 0.28
SHISA3A0PJX4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHISA3A0PJX4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHISA3A0PJX4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHISA3A0PJX4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHISA3A0PJX4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.8■□□□□ 0.28
SHISA3A0PJX4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SHISA3A0PJX4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.8■□□□□ 0.28
SHISA3A0PJX4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHISA3A0PJX4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.8■□□□□ 0.28
SHISA3A0PJX4 AL355472.2-201ENST00000422958 438 ntBASIC16.8■□□□□ 0.28
SHISA3A0PJX4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
SHISA3A0PJX4 CYP2T3P-201ENST00000601990 817 ntBASIC16.8■□□□□ 0.28
SHISA3A0PJX4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SHISA3A0PJX4 AC013268.1-206ENST00000638368 961 ntBASIC16.8■□□□□ 0.28
SHISA3A0PJX4 AC112229.1-201ENST00000639295 961 ntBASIC16.8■□□□□ 0.28
SHISA3A0PJX4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SHISA3A0PJX4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.8■□□□□ 0.28
SHISA3A0PJX4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHISA3A0PJX4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.8■□□□□ 0.28
SHISA3A0PJX4 AC139713.2-201ENST00000641328 2723 ntBASIC16.8■□□□□ 0.28
SHISA3A0PJX4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHISA3A0PJX4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.8■□□□□ 0.28
SHISA3A0PJX4 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.8■□□□□ 0.28
SHISA3A0PJX4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHISA3A0PJX4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SHISA3A0PJX4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHISA3A0PJX4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.79■□□□□ 0.28
SHISA3A0PJX4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.79■□□□□ 0.28
SHISA3A0PJX4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.79■□□□□ 0.28
SHISA3A0PJX4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHISA3A0PJX4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHISA3A0PJX4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHISA3A0PJX4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHISA3A0PJX4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SHISA3A0PJX4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHISA3A0PJX4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.79■□□□□ 0.28
SHISA3A0PJX4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHISA3A0PJX4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHISA3A0PJX4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.79■□□□□ 0.28
SHISA3A0PJX4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC16.79■□□□□ 0.28
SHISA3A0PJX4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SHISA3A0PJX4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SHISA3A0PJX4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.79■□□□□ 0.28
SHISA3A0PJX4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SHISA3A0PJX4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SHISA3A0PJX4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SHISA3A0PJX4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SHISA3A0PJX4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHISA3A0PJX4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.78■□□□□ 0.28
SHISA3A0PJX4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHISA3A0PJX4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHISA3A0PJX4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHISA3A0PJX4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SHISA3A0PJX4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHISA3A0PJX4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHISA3A0PJX4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHISA3A0PJX4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SHISA3A0PJX4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SHISA3A0PJX4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.78■□□□□ 0.28
SHISA3A0PJX4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SHISA3A0PJX4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.78■□□□□ 0.28
SHISA3A0PJX4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SHISA3A0PJX4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.78■□□□□ 0.28
SHISA3A0PJX4 C2orf69P4-201ENST00000565394 541 ntBASIC16.78■□□□□ 0.28
SHISA3A0PJX4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms