Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 MKRN4P-201ENST00000444706 1521 ntBASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 NFIC-211ENST00000641145 8399 ntBASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 CRK-204ENST00000574295 1391 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV21A0A0B4J279 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV21A0A0B4J279 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.11
TRAV21A0A0B4J279 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.11
TRAV21A0A0B4J279 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV21A0A0B4J279 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV21A0A0B4J279 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV21A0A0B4J279 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV21A0A0B4J279 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV21A0A0B4J279 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV21A0A0B4J279 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TRAV21A0A0B4J279 RER1-204ENST00000378518 522 ntTSL 3 BASIC14.33□□□□□ -0.12
TRAV21A0A0B4J279 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV21A0A0B4J279 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV21A0A0B4J279 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TRAV21A0A0B4J279 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC14.33□□□□□ -0.12
TRAV21A0A0B4J279 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV21A0A0B4J279 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV21A0A0B4J279 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV21A0A0B4J279 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV21A0A0B4J279 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV21A0A0B4J279 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV21A0A0B4J279 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV21A0A0B4J279 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV21A0A0B4J279 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
TRAV21A0A0B4J279 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV21A0A0B4J279 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TRAV21A0A0B4J279 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV21A0A0B4J279 TEX21P-204ENST00000641479 1693 ntBASIC14.33□□□□□ -0.12
TRAV21A0A0B4J279 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
TRAV21A0A0B4J279 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV21A0A0B4J279 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 GGT1-206ENST00000404223 952 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 RARRES2P6-201ENST00000567333 442 ntBASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 AC005829.2-201ENST00000571422 1056 ntBASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 RAP2CP1-201ENST00000605103 478 ntBASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV21A0A0B4J279 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV21A0A0B4J279 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms