Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
IGKV2-28A0A075B6P5 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
IGKV2-28A0A075B6P5 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
IGKV2-28A0A075B6P5 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
IGKV2-28A0A075B6P5 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
IGKV2-28A0A075B6P5 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC12.74□□□□□ -0.37
IGKV2-28A0A075B6P5 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
IGKV2-28A0A075B6P5 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC12.74□□□□□ -0.37
IGKV2-28A0A075B6P5 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
IGKV2-28A0A075B6P5 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
IGKV2-28A0A075B6P5 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
IGKV2-28A0A075B6P5 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
IGKV2-28A0A075B6P5 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
IGKV2-28A0A075B6P5 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
IGKV2-28A0A075B6P5 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC12.74□□□□□ -0.37
IGKV2-28A0A075B6P5 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
IGKV2-28A0A075B6P5 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
IGKV2-28A0A075B6P5 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
IGKV2-28A0A075B6P5 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
IGKV2-28A0A075B6P5 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
IGKV2-28A0A075B6P5 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
IGKV2-28A0A075B6P5 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 KRT16P6-202ENST00000425692 1426 ntBASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 KRT8P17-201ENST00000453110 1448 ntBASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 PARP1-202ENST00000366792 553 ntTSL 3 BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 PGM5P4-201ENST00000421970 445 ntBASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 AC141586.3-201ENST00000562166 1838 ntBASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 Z98044.1-201ENST00000632503 1764 ntBASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 AC093525.10-201ENST00000625130 1569 ntBASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
IGKV2-28A0A075B6P5 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
IGKV2-28A0A075B6P5 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
IGKV2-28A0A075B6P5 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
IGKV2-28A0A075B6P5 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
IGKV2-28A0A075B6P5 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
IGKV2-28A0A075B6P5 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC12.72□□□□□ -0.37
IGKV2-28A0A075B6P5 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC12.72□□□□□ -0.37
IGKV2-28A0A075B6P5 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
IGKV2-28A0A075B6P5 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
IGKV2-28A0A075B6P5 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
IGKV2-28A0A075B6P5 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC12.72□□□□□ -0.37
IGKV2-28A0A075B6P5 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC12.72□□□□□ -0.37
IGKV2-28A0A075B6P5 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
IGKV2-28A0A075B6P5 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC12.72□□□□□ -0.37
IGKV2-28A0A075B6P5 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
IGKV2-28A0A075B6P5 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
IGKV2-28A0A075B6P5 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC12.72□□□□□ -0.37
IGKV2-28A0A075B6P5 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
IGKV2-28A0A075B6P5 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
IGKV2-28A0A075B6P5 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
IGKV2-28A0A075B6P5 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC12.72□□□□□ -0.37
IGKV2-28A0A075B6P5 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
IGKV2-28A0A075B6P5 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
IGKV2-28A0A075B6P5 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
IGKV2-28A0A075B6P5 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
IGKV2-28A0A075B6P5 GUK1-205ENST00000366722 850 ntTSL 3 BASIC12.72□□□□□ -0.37
IGKV2-28A0A075B6P5 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
IGKV2-28A0A075B6P5 SAPCD2P1-201ENST00000395413 1184 ntBASIC12.72□□□□□ -0.37
IGKV2-28A0A075B6P5 BMP1-204ENST00000397814 836 ntTSL 4 BASIC12.72□□□□□ -0.37
IGKV2-28A0A075B6P5 AC097381.1-201ENST00000429019 1296 ntBASIC12.72□□□□□ -0.37
IGKV2-28A0A075B6P5 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
IGKV2-28A0A075B6P5 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
IGKV2-28A0A075B6P5 CD44-222ENST00000526025 1052 ntTSL 2 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms