Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 OSBPL9P3-201ENST00000534523 595 ntBASIC3.36□□□□□ -1.87
RFX4Q33E94 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.36□□□□□ -1.87
RFX4Q33E94 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RFX4Q33E94 POLR2KP1-201ENST00000553226 168 ntBASIC3.36□□□□□ -1.87
RFX4Q33E94 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.36□□□□□ -1.87
RFX4Q33E94 AC104229.1-201ENST00000561364 255 ntBASIC3.36□□□□□ -1.87
RFX4Q33E94 AC079148.1-201ENST00000565944 819 ntBASIC3.36□□□□□ -1.87
RFX4Q33E94 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.36□□□□□ -1.87
RFX4Q33E94 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.36□□□□□ -1.87
RFX4Q33E94 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.36□□□□□ -1.87
RFX4Q33E94 MIR378J-201ENST00000611988 109 ntBASIC3.36□□□□□ -1.87
RFX4Q33E94 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RFX4Q33E94 AL163051.2-201ENST00000618976 735 ntBASIC3.36□□□□□ -1.87
RFX4Q33E94 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RFX4Q33E94 U6.98-201ENST00000637157 84 ntBASIC3.36□□□□□ -1.87
RFX4Q33E94 AP000553.6-201ENST00000641242 118 ntBASIC3.36□□□□□ -1.87
RFX4Q33E94 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RFX4Q33E94 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RFX4Q33E94 ZNF33CP-201ENST00000432492 2030 ntBASIC3.36□□□□□ -1.87
RFX4Q33E94 AC024560.2-201ENST00000507981 1497 ntBASIC3.35□□□□□ -1.87
RFX4Q33E94 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RFX4Q33E94 AL513302.2-201ENST00000562313 1842 ntBASIC3.35□□□□□ -1.87
RFX4Q33E94 AF127577.6-201ENST00000623352 2191 ntBASIC3.35□□□□□ -1.87
RFX4Q33E94 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.35□□□□□ -1.87
RFX4Q33E94 SPRR2C-201ENST00000290702 219 ntBASIC3.35□□□□□ -1.87
RFX4Q33E94 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RFX4Q33E94 Y_RNA.110-201ENST00000363220 99 ntBASIC3.35□□□□□ -1.87
RFX4Q33E94 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.35□□□□□ -1.87
RFX4Q33E94 EI24P2-201ENST00000397776 1076 ntBASIC3.35□□□□□ -1.87
RFX4Q33E94 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.35□□□□□ -1.87
RFX4Q33E94 HMGB3P31-201ENST00000413333 595 ntBASIC3.35□□□□□ -1.87
RFX4Q33E94 AL445183.3-201ENST00000414168 502 ntBASIC3.35□□□□□ -1.87
RFX4Q33E94 AC093578.1-201ENST00000415219 368 ntBASIC3.35□□□□□ -1.87
RFX4Q33E94 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.35□□□□□ -1.87
RFX4Q33E94 AL121882.1-201ENST00000422893 417 ntBASIC3.35□□□□□ -1.87
RFX4Q33E94 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.35□□□□□ -1.87
RFX4Q33E94 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.35□□□□□ -1.87
RFX4Q33E94 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.35□□□□□ -1.87
RFX4Q33E94 AL357552.1-201ENST00000445254 415 ntBASIC3.35□□□□□ -1.87
RFX4Q33E94 TPT1P12-201ENST00000448968 492 ntBASIC3.35□□□□□ -1.87
RFX4Q33E94 AC010655.1-201ENST00000449336 292 ntBASIC3.35□□□□□ -1.87
RFX4Q33E94 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.35□□□□□ -1.87
RFX4Q33E94 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RFX4Q33E94 CFTRP1-201ENST00000456646 183 ntBASIC3.35□□□□□ -1.87
RFX4Q33E94 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.35□□□□□ -1.87
RFX4Q33E94 OR9M1P-201ENST00000459641 921 ntBASIC3.35□□□□□ -1.87
RFX4Q33E94 TMED11P-201ENST00000479478 690 ntBASIC3.35□□□□□ -1.87
RFX4Q33E94 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.35□□□□□ -1.87
RFX4Q33E94 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.35□□□□□ -1.87
RFX4Q33E94 FTH1P21-201ENST00000512179 511 ntBASIC3.35□□□□□ -1.87
RFX4Q33E94 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.35□□□□□ -1.87
RFX4Q33E94 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.35□□□□□ -1.87
RFX4Q33E94 RNU2-58P-201ENST00000516403 183 ntBASIC3.35□□□□□ -1.87
RFX4Q33E94 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.35□□□□□ -1.87
RFX4Q33E94 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.35□□□□□ -1.87
RFX4Q33E94 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.35□□□□□ -1.87
RFX4Q33E94 AP003049.1-201ENST00000529418 457 ntBASIC3.35□□□□□ -1.87
RFX4Q33E94 MTND5P21-201ENST00000531961 522 ntBASIC3.35□□□□□ -1.87
RFX4Q33E94 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.35□□□□□ -1.87
RFX4Q33E94 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.35□□□□□ -1.87
RFX4Q33E94 AL845331.3-202ENST00000562856 261 ntBASIC3.35□□□□□ -1.87
RFX4Q33E94 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.35□□□□□ -1.87
RFX4Q33E94 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.35□□□□□ -1.87
RFX4Q33E94 AL590392.1-201ENST00000604960 446 ntBASIC3.35□□□□□ -1.87
RFX4Q33E94 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.35□□□□□ -1.87
RFX4Q33E94 OR2BH1P-201ENST00000608850 864 ntBASIC3.35□□□□□ -1.87
RFX4Q33E94 AL450489.1-201ENST00000612071 468 ntBASIC3.35□□□□□ -1.87
RFX4Q33E94 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RFX4Q33E94 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RFX4Q33E94 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.35□□□□□ -1.87
RFX4Q33E94 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.35□□□□□ -1.87
RFX4Q33E94 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.35□□□□□ -1.87
RFX4Q33E94 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
RFX4Q33E94 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RFX4Q33E94 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RFX4Q33E94 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.35□□□□□ -1.87
RFX4Q33E94 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RFX4Q33E94 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RFX4Q33E94 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RFX4Q33E94 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.34□□□□□ -1.87
RFX4Q33E94 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RFX4Q33E94 AC119744.1-201ENST00000454746 1715 ntBASIC3.34□□□□□ -1.87
RFX4Q33E94 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
RFX4Q33E94 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RFX4Q33E94 AC068538.1-201ENST00000376856 336 ntBASIC3.34□□□□□ -1.87
RFX4Q33E94 RNU1-13P-201ENST00000384499 162 ntBASIC3.34□□□□□ -1.87
RFX4Q33E94 ATP5F1P6-201ENST00000402768 767 ntBASIC3.34□□□□□ -1.87
RFX4Q33E94 HSPE1P26-201ENST00000405341 275 ntBASIC3.34□□□□□ -1.87
RFX4Q33E94 MTATP6P31-201ENST00000406985 692 ntBASIC3.34□□□□□ -1.87
RFX4Q33E94 MIR1303-201ENST00000408625 86 ntBASIC3.34□□□□□ -1.87
RFX4Q33E94 RNA5SP293-201ENST00000410527 113 ntBASIC3.34□□□□□ -1.87
RFX4Q33E94 RNU2-72P-201ENST00000411175 163 ntBASIC3.34□□□□□ -1.87
RFX4Q33E94 RNA5SP107-201ENST00000411358 122 ntBASIC3.34□□□□□ -1.87
RFX4Q33E94 AC245291.1-201ENST00000419501 328 ntBASIC3.34□□□□□ -1.87
RFX4Q33E94 COX6CP17-201ENST00000421389 185 ntBASIC3.34□□□□□ -1.87
RFX4Q33E94 GLRXP1-201ENST00000423261 334 ntBASIC3.34□□□□□ -1.87
RFX4Q33E94 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
RFX4Q33E94 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.34□□□□□ -1.87
RFX4Q33E94 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.34□□□□□ -1.87
RFX4Q33E94 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms