RNA–Protein interactions for RNA: ENST00000509964.1

LINC02493-201, Transcript of long intergenic non-protein coding RNA 2493, humanhuman

TSL 1 (best) BASIC

Gene LINC02493, Length 1,704 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02493-201ENST00000509964 AEBP2Q6ZN18 517 aaPredicted RBP20.43■□□□□ 0.86
LINC02493-201ENST00000509964 CHIC1Q5VXU3 224 aa19.39■□□□□ 0.69
LINC02493-201ENST00000509964 SENP3Q9H4L4 574 aaPredicted RBP17.18■□□□□ 0.34
LINC02493-201ENST00000509964 PHF23Q9BUL5 403 aaPredicted RBP17.14■□□□□ 0.33
LINC02493-201ENST00000509964 FOXD1Q16676 465 aa16.14■□□□□ 0.17
LINC02493-201ENST00000509964 PLPPR3Q6T4P5 718 aa15.47■□□□□ 0.07
LINC02493-201ENST00000509964 PPP6R1Q9UPN7 881 aa15.29■□□□□ 0.04
LINC02493-201ENST00000509964 ADRA2BP18089 450 aa15.19■□□□□ 0.02
LINC02493-201ENST00000509964 POTEDQ86YR6 584 aa15.1■□□□□ 0.01
LINC02493-201ENST00000509964 PIAS4Q8N2W9 510 aaPredicted RBP15.04■□□□□ -0
LINC02493-201ENST00000509964 MSH5O43196 834 aa14.89□□□□□ -0.03
LINC02493-201ENST00000509964 MAPK8IP2Q13387 824 aaPredicted RBP13.95□□□□□ -0.18
LINC02493-201ENST00000509964 DMRT2Q9Y5R5 561 aa13.71□□□□□ -0.21
LINC02493-201ENST00000509964 PPP4R3CPQ6ZMV5 832 aa13.64□□□□□ -0.23
LINC02493-201ENST00000509964 SCAF1Q9H7N4 1312 aaKnown RBP13.64□□□□□ -0.23
LINC02493-201ENST00000509964 CNKSR2Q8WXI2 1034 aa13.3□□□□□ -0.28
LINC02493-201ENST00000509964 HOXD11P31277 338 aaPredicted RBP13.26□□□□□ -0.29
LINC02493-201ENST00000509964 RNF216Q9NWF9 866 aaPredicted RBP13.16□□□□□ -0.3
LINC02493-201ENST00000509964 DCAF8L1A6NGE4 600 aa13.11□□□□□ -0.31
LINC02493-201ENST00000509964 NPM3O75607 178 aaKnown RBP13.02□□□□□ -0.33
LINC02493-201ENST00000509964 NCBP3Q53F19 620 aaKnown RBP13.01□□□□□ -0.33
LINC02493-201ENST00000509964 KCNA4P22459 653 aa12.92□□□□□ -0.34
LINC02493-201ENST00000509964 CACNB1Q02641 598 aaPredicted RBP12.92□□□□□ -0.34
LINC02493-201ENST00000509964 RNF39Q9H2S5 420 aa12.82□□□□□ -0.36
LINC02493-201ENST00000509964 DNAJC5BQ9UF47 199 aa12.66□□□□□ -0.38
LINC02493-201ENST00000509964 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.57□□□□□ -0.4
LINC02493-201ENST00000509964 C1QBPQ07021 282 aaKnown RBP12.54□□□□□ -0.4
LINC02493-201ENST00000509964 SLC4A2P04920 1241 aa12.45□□□□□ -0.42
LINC02493-201ENST00000509964 U3KPZ7 1027 aaPredicted RBP12.43□□□□□ -0.42
LINC02493-201ENST00000509964 SPINK5Q9NQ38 1064 aaPredicted RBP12.25□□□□□ -0.45
LINC02493-201ENST00000509964 SLC4A1APQ9BWU0 796 aaKnown RBP12.11□□□□□ -0.47
LINC02493-201ENST00000509964 CAPN15O75808 1086 aa12.1□□□□□ -0.47
LINC02493-201ENST00000509964 DSG3P32926 999 aa12.07□□□□□ -0.48
LINC02493-201ENST00000509964 TRHP20396 242 aaPredicted RBP11.97□□□□□ -0.49
LINC02493-201ENST00000509964 ZBTB22O15209 634 aa11.96□□□□□ -0.49
LINC02493-201ENST00000509964 ABCB7O75027 752 aa11.92□□□□□ -0.5
LINC02493-201ENST00000509964 MYCNP04198 464 aaPredicted RBP11.92□□□□□ -0.5
LINC02493-201ENST00000509964 FOXD4L1Q9NU39 408 aa11.9□□□□□ -0.5
LINC02493-201ENST00000509964 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.89□□□□□ -0.51
LINC02493-201ENST00000509964 HNRNPUL2Q1KMD3 747 aaKnown RBP11.89□□□□□ -0.51
LINC02493-201ENST00000509964 SAMD1Q6SPF0 538 aaPredicted RBP11.89□□□□□ -0.51
LINC02493-201ENST00000509964 ZNF219Q9P2Y4 722 aaPredicted RBP11.85□□□□□ -0.51
LINC02493-201ENST00000509964 ATF5Q9Y2D1 282 aaPredicted RBP11.85□□□□□ -0.51
LINC02493-201ENST00000509964 APLP2Q06481 763 aa11.81□□□□□ -0.52
LINC02493-201ENST00000509964 POTEHQ6S545 545 aa11.74□□□□□ -0.53
LINC02493-201ENST00000509964 POLA2Q14181 598 aa11.69□□□□□ -0.54
LINC02493-201ENST00000509964 CSRNP3Q8WYN3 585 aa11.46□□□□□ -0.57
LINC02493-201ENST00000509964 ATXN8OSP0DMR3 200 aa11.46□□□□□ -0.58
LINC02493-201ENST00000509964 EHMT2Q96KQ7 1210 aa11.35□□□□□ -0.59
LINC02493-201ENST00000509964 OSCARQ8IYS5 282 aa11.34□□□□□ -0.59
LINC02493-201ENST00000509964 RBM42Q9BTD8 480 aaKnown RBP11.33□□□□□ -0.6
LINC02493-201ENST00000509964 ZBTB12Q9Y330 459 aaPredicted RBP11.29□□□□□ -0.6
LINC02493-201ENST00000509964 MKRN4PQ13434 485 aaPredicted RBP11.27□□□□□ -0.61
LINC02493-201ENST00000509964 AKT1S1Q96B36 256 aa11.18□□□□□ -0.62
LINC02493-201ENST00000509964 CHRDL2Q6WN34 429 aa11.16□□□□□ -0.62
LINC02493-201ENST00000509964 REM2Q8IYK8 340 aaPredicted RBP11.15□□□□□ -0.63
LINC02493-201ENST00000509964 FBLN2P98095 1184 aa11.11□□□□□ -0.63
LINC02493-201ENST00000509964 PITPNM1O00562 1244 aa11.05□□□□□ -0.64
LINC02493-201ENST00000509964 SPDYE2BA6NHP3 402 aa11.03□□□□□ -0.64
LINC02493-201ENST00000509964 SPDYE6P0CI01 402 aa11.03□□□□□ -0.64
LINC02493-201ENST00000509964 SPDYE2Q495Y8 402 aa11.03□□□□□ -0.64
LINC02493-201ENST00000509964 PIP4P2Q8N4L2 257 aa10.98□□□□□ -0.65
LINC02493-201ENST00000509964 SSUH2Q9Y2M2 353 aa10.98□□□□□ -0.65
LINC02493-201ENST00000509964 ZNF692Q9BU19 519 aaPredicted RBP10.95□□□□□ -0.66
LINC02493-201ENST00000509964 FXR2P51116 673 aaKnown RBP eCLIP10.91□□□□□ -0.66
LINC02493-201ENST00000509964 PABPN1Q86U42 306 aaKnown RBP eCLIP10.84□□□□□ -0.67
LINC02493-201ENST00000509964 CLEC11AQ9Y240 323 aa10.84□□□□□ -0.67
LINC02493-201ENST00000509964 SP7Q8TDD2 431 aaPredicted RBP10.83□□□□□ -0.68
LINC02493-201ENST00000509964 SPDYE1Q8NFV5 336 aaPredicted RBP10.79□□□□□ -0.68
LINC02493-201ENST00000509964 EVX2Q03828 476 aa10.73□□□□□ -0.69
LINC02493-201ENST00000509964 PRKAR2AP13861 404 aaKnown RBP10.72□□□□□ -0.69
LINC02493-201ENST00000509964 CHADLQ6NUI6 762 aa10.71□□□□□ -0.69
LINC02493-201ENST00000509964 SPDYE4A6NLX3 237 aa10.69□□□□□ -0.7
LINC02493-201ENST00000509964 HAX1O00165 279 aa10.67□□□□□ -0.7
LINC02493-201ENST00000509964 PRR29P0C7W0 189 aa10.64□□□□□ -0.71
LINC02493-201ENST00000509964 C19orf67A6NJJ6 358 aa10.55□□□□□ -0.72
LINC02493-201ENST00000509964 CREBZFQ9NS37 354 aa10.51□□□□□ -0.73
LINC02493-201ENST00000509964 PROM2Q8N271 834 aa10.5□□□□□ -0.73
LINC02493-201ENST00000509964 FARP1Q9Y4F1 1045 aaPredicted RBP10.49□□□□□ -0.73
LINC02493-201ENST00000509964 STAG3Q9UJ98 1225 aa10.41□□□□□ -0.74
LINC02493-201ENST00000509964 MNX1P50219 401 aaPredicted RBP10.38□□□□□ -0.75
LINC02493-201ENST00000509964 CD44P16070 742 aaKnown RBP10.38□□□□□ -0.75
LINC02493-201ENST00000509964 GABBR2O75899 941 aa10.37□□□□□ -0.75
LINC02493-201ENST00000509964 FKBP8Q14318 412 aa10.32□□□□□ -0.76
LINC02493-201ENST00000509964 ZRANB1Q9UGI0 708 aa10.25□□□□□ -0.77
LINC02493-201ENST00000509964 POTEIP0CG38 1075 aa10.24□□□□□ -0.77
LINC02493-201ENST00000509964 ZNF579Q8NAF0 562 aaKnown RBP10.21□□□□□ -0.77
LINC02493-201ENST00000509964 PHF12Q96QT6 1004 aa10.19□□□□□ -0.78
LINC02493-201ENST00000509964 GALR2O43603 387 aaPredicted RBP10.17□□□□□ -0.78
LINC02493-201ENST00000509964 LHX8Q68G74 356 aa10.16□□□□□ -0.78
LINC02493-201ENST00000509964 MIER1Q8N108 512 aa10.15□□□□□ -0.78
LINC02493-201ENST00000509964 NPM1P06748 294 aaKnown RBP eCLIP10.14□□□□□ -0.79
LINC02493-201ENST00000509964 TSPYL2Q9H2G4 693 aaPredicted RBP10.1□□□□□ -0.79
LINC02493-201ENST00000509964 RASEFQ8IZ41 740 aa10.1□□□□□ -0.79
LINC02493-201ENST00000509964 CCDC61Q9Y6R9 512 aa10.07□□□□□ -0.8
LINC02493-201ENST00000509964 PAK3O75914 559 aaPredicted RBP10.05□□□□□ -0.8
LINC02493-201ENST00000509964 PLCD3Q8N3E9 789 aa10.05□□□□□ -0.8
LINC02493-201ENST00000509964 MS4A3Q96HJ5 214 aa10.04□□□□□ -0.8
LINC02493-201ENST00000509964 CLCN6P51797 869 aa10.03□□□□□ -0.8
LINC02493-201ENST00000509964 NUBP1P53384 320 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms