RNA–Protein interactions for RNA: ENST00000381984.2

RFX3-203, Transcript of regulatory factor X3, humanhuman

TSL 3 BASIC

Gene RFX3, Length 364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-203ENST00000381984 AEBP2Q6ZN18 517 aaPredicted RBP18.33■□□□□ 0.52
RFX3-203ENST00000381984 CHIC1Q5VXU3 224 aa17.01■□□□□ 0.31
RFX3-203ENST00000381984 SENP3Q9H4L4 574 aaPredicted RBP15.61■□□□□ 0.09
RFX3-203ENST00000381984 PHF23Q9BUL5 403 aaPredicted RBP15.41■□□□□ 0.06
RFX3-203ENST00000381984 FOXD1Q16676 465 aa14.69□□□□□ -0.06
RFX3-203ENST00000381984 POTEDQ86YR6 584 aa14.49□□□□□ -0.09
RFX3-203ENST00000381984 MSH5O43196 834 aa13.86□□□□□ -0.19
RFX3-203ENST00000381984 PIAS4Q8N2W9 510 aaPredicted RBP13.54□□□□□ -0.24
RFX3-203ENST00000381984 PPP6R1Q9UPN7 881 aa13.38□□□□□ -0.27
RFX3-203ENST00000381984 ADRA2BP18089 450 aa13.29□□□□□ -0.28
RFX3-203ENST00000381984 PLPPR3Q6T4P5 718 aa13.18□□□□□ -0.3
RFX3-203ENST00000381984 MAPK8IP2Q13387 824 aaPredicted RBP12.39□□□□□ -0.43
RFX3-203ENST00000381984 DMRT2Q9Y5R5 561 aa12.33□□□□□ -0.44
RFX3-203ENST00000381984 CACNB1Q02641 598 aaPredicted RBP12.25□□□□□ -0.45
RFX3-203ENST00000381984 SCAF1Q9H7N4 1312 aaKnown RBP12.06□□□□□ -0.48
RFX3-203ENST00000381984 DCAF8L1A6NGE4 600 aa11.84□□□□□ -0.51
RFX3-203ENST00000381984 RNF39Q9H2S5 420 aa11.83□□□□□ -0.52
RFX3-203ENST00000381984 HOXD11P31277 338 aaPredicted RBP11.68□□□□□ -0.54
RFX3-203ENST00000381984 C1QBPQ07021 282 aaKnown RBP11.59□□□□□ -0.55
RFX3-203ENST00000381984 PPP4R3CPQ6ZMV5 832 aa11.53□□□□□ -0.56
RFX3-203ENST00000381984 RNF216Q9NWF9 866 aaPredicted RBP11.43□□□□□ -0.58
RFX3-203ENST00000381984 CNKSR2Q8WXI2 1034 aa11.4□□□□□ -0.58
RFX3-203ENST00000381984 DNAJC5BQ9UF47 199 aa11.34□□□□□ -0.59
RFX3-203ENST00000381984 POTEHQ6S545 545 aa11.23□□□□□ -0.61
RFX3-203ENST00000381984 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.11□□□□□ -0.63
RFX3-203ENST00000381984 DSG3P32926 999 aa10.92□□□□□ -0.66
RFX3-203ENST00000381984 NCBP3Q53F19 620 aaKnown RBP10.87□□□□□ -0.67
RFX3-203ENST00000381984 SPINK5Q9NQ38 1064 aaPredicted RBP10.87□□□□□ -0.67
RFX3-203ENST00000381984 U3KPZ7 1027 aaPredicted RBP10.85□□□□□ -0.67
RFX3-203ENST00000381984 CAPN15O75808 1086 aa10.82□□□□□ -0.68
RFX3-203ENST00000381984 NPM3O75607 178 aaKnown RBP10.77□□□□□ -0.69
RFX3-203ENST00000381984 ABCB7O75027 752 aa10.55□□□□□ -0.72
RFX3-203ENST00000381984 TRHP20396 242 aaPredicted RBP10.54□□□□□ -0.72
RFX3-203ENST00000381984 SLC4A2P04920 1241 aa10.46□□□□□ -0.73
RFX3-203ENST00000381984 ZNF219Q9P2Y4 722 aaPredicted RBP10.44□□□□□ -0.74
RFX3-203ENST00000381984 CHRDL2Q6WN34 429 aa10.38□□□□□ -0.75
RFX3-203ENST00000381984 APLP2Q06481 763 aa10.37□□□□□ -0.75
RFX3-203ENST00000381984 RBM42Q9BTD8 480 aaKnown RBP10.34□□□□□ -0.75
RFX3-203ENST00000381984 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.27□□□□□ -0.77
RFX3-203ENST00000381984 HNRNPUL2Q1KMD3 747 aaKnown RBP10.27□□□□□ -0.77
RFX3-203ENST00000381984 SP7Q8TDD2 431 aaPredicted RBP10.27□□□□□ -0.77
RFX3-203ENST00000381984 SAMD1Q6SPF0 538 aaPredicted RBP10.21□□□□□ -0.77
RFX3-203ENST00000381984 POLA2Q14181 598 aa10.15□□□□□ -0.78
RFX3-203ENST00000381984 KCNA4P22459 653 aa10.12□□□□□ -0.79
RFX3-203ENST00000381984 PIP4P2Q8N4L2 257 aa10.05□□□□□ -0.8
RFX3-203ENST00000381984 AKT1S1Q96B36 256 aa10.04□□□□□ -0.8
RFX3-203ENST00000381984 HAX1O00165 279 aa9.99□□□□□ -0.81
RFX3-203ENST00000381984 REM2Q8IYK8 340 aaPredicted RBP9.99□□□□□ -0.81
RFX3-203ENST00000381984 MYCNP04198 464 aaPredicted RBP9.92□□□□□ -0.82
RFX3-203ENST00000381984 EVX2Q03828 476 aa9.91□□□□□ -0.82
RFX3-203ENST00000381984 FXR2P51116 673 aaKnown RBP eCLIP9.9□□□□□ -0.82
RFX3-203ENST00000381984 PITPNM1O00562 1244 aa9.86□□□□□ -0.83
RFX3-203ENST00000381984 ATF5Q9Y2D1 282 aaPredicted RBP9.84□□□□□ -0.83
RFX3-203ENST00000381984 OSCARQ8IYS5 282 aa9.82□□□□□ -0.84
RFX3-203ENST00000381984 ZBTB12Q9Y330 459 aaPredicted RBP9.81□□□□□ -0.84
RFX3-203ENST00000381984 LHX8Q68G74 356 aa9.64□□□□□ -0.87
RFX3-203ENST00000381984 GABBR2O75899 941 aa9.61□□□□□ -0.87
RFX3-203ENST00000381984 PRKAR2AP13861 404 aaKnown RBP9.61□□□□□ -0.87
RFX3-203ENST00000381984 C19orf67A6NJJ6 358 aa9.6□□□□□ -0.87
RFX3-203ENST00000381984 FOXD4L1Q9NU39 408 aa9.55□□□□□ -0.88
RFX3-203ENST00000381984 SPDYE2BA6NHP3 402 aa9.51□□□□□ -0.89
RFX3-203ENST00000381984 SPDYE6P0CI01 402 aa9.51□□□□□ -0.89
RFX3-203ENST00000381984 SPDYE2Q495Y8 402 aa9.51□□□□□ -0.89
RFX3-203ENST00000381984 CLEC11AQ9Y240 323 aa9.51□□□□□ -0.89
RFX3-203ENST00000381984 SPDYE1Q8NFV5 336 aaPredicted RBP9.47□□□□□ -0.89
RFX3-203ENST00000381984 PLSCR2Q9NRY7 297 aa9.45□□□□□ -0.9
RFX3-203ENST00000381984 POTEIP0CG38 1075 aa9.43□□□□□ -0.9
RFX3-203ENST00000381984 CHADLQ6NUI6 762 aa9.42□□□□□ -0.9
RFX3-203ENST00000381984 SLC4A1APQ9BWU0 796 aaKnown RBP9.41□□□□□ -0.9
RFX3-203ENST00000381984 FBLN2P98095 1184 aa9.38□□□□□ -0.91
RFX3-203ENST00000381984 SSUH2Q9Y2M2 353 aa9.35□□□□□ -0.91
RFX3-203ENST00000381984 MKRN4PQ13434 485 aaPredicted RBP9.34□□□□□ -0.91
RFX3-203ENST00000381984 ZNF692Q9BU19 519 aaPredicted RBP9.34□□□□□ -0.91
RFX3-203ENST00000381984 ZBTB22O15209 634 aa9.31□□□□□ -0.92
RFX3-203ENST00000381984 ATXN8OSP0DMR3 200 aa9.3□□□□□ -0.92
RFX3-203ENST00000381984 PRR29P0C7W0 189 aa9.27□□□□□ -0.93
RFX3-203ENST00000381984 CD44P16070 742 aaKnown RBP9.26□□□□□ -0.93
RFX3-203ENST00000381984 PABPN1Q86U42 306 aaKnown RBP eCLIP9.2□□□□□ -0.94
RFX3-203ENST00000381984 FARP1Q9Y4F1 1045 aaPredicted RBP9.2□□□□□ -0.94
RFX3-203ENST00000381984 CLCN6P51797 869 aa9.18□□□□□ -0.94
RFX3-203ENST00000381984 DCBLD2Q96PD2 775 aa9.18□□□□□ -0.94
RFX3-203ENST00000381984 OTUD5Q96G74 571 aa9.15□□□□□ -0.94
RFX3-203ENST00000381984 POTEB2H3BUK9 544 aa9.11□□□□□ -0.95
RFX3-203ENST00000381984 POTEMA6NI47 508 aa9.1□□□□□ -0.95
RFX3-203ENST00000381984 ZNF579Q8NAF0 562 aaKnown RBP9.08□□□□□ -0.96
RFX3-203ENST00000381984 POTEGQ6S5H5 508 aa9.06□□□□□ -0.96
RFX3-203ENST00000381984 ZRANB1Q9UGI0 708 aa9.06□□□□□ -0.96
RFX3-203ENST00000381984 GALR2O43603 387 aaPredicted RBP9.05□□□□□ -0.96
RFX3-203ENST00000381984 PELP1Q8IZL8 1130 aaKnown RBP8.96□□□□□ -0.98
RFX3-203ENST00000381984 CREBZFQ9NS37 354 aa8.95□□□□□ -0.98
RFX3-203ENST00000381984 PCDH10Q9P2E7 1040 aa8.94□□□□□ -0.98
RFX3-203ENST00000381984 POTEJP0CG39 1038 aa8.91□□□□□ -0.98
RFX3-203ENST00000381984 PHF12Q96QT6 1004 aa8.9□□□□□ -0.98
RFX3-203ENST00000381984 LCE2DQ5TA82 110 aaPredicted RBP8.87□□□□□ -0.99
RFX3-203ENST00000381984 METRNQ9UJH8 293 aa8.82□□□□□ -1
RFX3-203ENST00000381984 FAM163AQ96GL9 167 aaPredicted RBP8.81□□□□□ -1
RFX3-203ENST00000381984 PAK3O75914 559 aaPredicted RBP8.8□□□□□ -1
RFX3-203ENST00000381984 ASTLQ6HA08 431 aaPredicted RBP8.8□□□□□ -1
RFX3-203ENST00000381984 ATMINO43313 823 aaPredicted RBP8.79□□□□□ -1
RFX3-203ENST00000381984 C7P10643 843 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms