Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
LINC01561Q8N1V8 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.09□□□□□ -1.92
LINC01561Q8N1V8 PABPC1P6-201ENST00000445594 1829 ntBASIC3.09□□□□□ -1.92
LINC01561Q8N1V8 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC3.09□□□□□ -1.92
LINC01561Q8N1V8 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
LINC01561Q8N1V8 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
LINC01561Q8N1V8 AC118273.1-201ENST00000525324 3006 ntBASIC3.09□□□□□ -1.92
LINC01561Q8N1V8 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.09□□□□□ -1.92
LINC01561Q8N1V8 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 GNAS-202ENST00000306090 477 ntTSL 5 BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 RNU1-15P-201ENST00000353977 144 ntBASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 RNU5D-1-201ENST00000363299 116 ntBASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 SNORD74.4-201ENST00000364129 80 ntBASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 RNU1-82P-201ENST00000390851 165 ntBASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 ARF4P3-201ENST00000397387 509 ntBASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 VN1R8P-201ENST00000407739 893 ntBASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 OR1AA1P-201ENST00000419597 916 ntBASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 HIGD1AP12-201ENST00000427832 281 ntBASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 USP9YP31-201ENST00000431405 881 ntBASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 CNOT7P2-201ENST00000441051 832 ntBASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 MTCO2P25-201ENST00000447065 681 ntBASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 AC108463.1-201ENST00000450258 347 ntBASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 AL133477.1-201ENST00000457472 514 ntBASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 RPL7P1-201ENST00000468161 747 ntBASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 HMGB1P25-201ENST00000468402 607 ntBASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 AC106872.2-201ENST00000494303 480 ntBASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 AC068305.1-201ENST00000497406 726 ntBASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 AC109458.1-201ENST00000508858 316 ntBASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 PARP4P3-201ENST00000510265 317 ntBASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 AC108064.1-201ENST00000513791 460 ntBASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 RN7SKP66-201ENST00000516681 231 ntBASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 AC092851.1-201ENST00000535964 478 ntBASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 RPL23AP97-201ENST00000568955 471 ntBASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 RN7SL652P-201ENST00000577769 300 ntBASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 VN1R83P-201ENST00000595685 445 ntBASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 AL451086.1-201ENST00000605596 223 ntBASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 AL391834.2-201ENST00000609982 546 ntBASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 AL121612.2-201ENST00000612261 482 ntBASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 AC009269.6-201ENST00000621778 588 ntBASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 AC120349.2-201ENST00000625002 298 ntBASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LINC01561Q8N1V8 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
LINC01561Q8N1V8 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.07□□□□□ -1.92
LINC01561Q8N1V8 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.07□□□□□ -1.92
LINC01561Q8N1V8 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.07□□□□□ -1.92
LINC01561Q8N1V8 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LINC01561Q8N1V8 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
LINC01561Q8N1V8 AP001148.1-201ENST00000624124 2359 ntBASIC3.07□□□□□ -1.92
LINC01561Q8N1V8 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
LINC01561Q8N1V8 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
LINC01561Q8N1V8 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LINC01561Q8N1V8 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LINC01561Q8N1V8 RNA5SP151-201ENST00000365632 117 ntBASIC3.07□□□□□ -1.92
LINC01561Q8N1V8 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC3.07□□□□□ -1.92
LINC01561Q8N1V8 MIR122-201ENST00000385044 85 ntBASIC3.07□□□□□ -1.92
LINC01561Q8N1V8 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms