RNA–Protein interactions for RNA: ENST00000636739.1

MIR548A1HG-201, Transcript of MIR548A1 host gene, humanhuman

TSL 4 BASIC

Gene MIR548A1HG, Length 558 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548A1HG-201ENST00000636739 AEBP2Q6ZN18 517 aaPredicted RBP22.34■■□□□ 1.17
MIR548A1HG-201ENST00000636739 CHIC1Q5VXU3 224 aa20.86■□□□□ 0.93
MIR548A1HG-201ENST00000636739 SENP3Q9H4L4 574 aaPredicted RBP18.89■□□□□ 0.61
MIR548A1HG-201ENST00000636739 PHF23Q9BUL5 403 aaPredicted RBP18.73■□□□□ 0.59
MIR548A1HG-201ENST00000636739 FOXD1Q16676 465 aa17.78■□□□□ 0.44
MIR548A1HG-201ENST00000636739 POTEDQ86YR6 584 aa16.71■□□□□ 0.27
MIR548A1HG-201ENST00000636739 MSH5O43196 834 aa16.55■□□□□ 0.24
MIR548A1HG-201ENST00000636739 PIAS4Q8N2W9 510 aaPredicted RBP16.53■□□□□ 0.24
MIR548A1HG-201ENST00000636739 PPP6R1Q9UPN7 881 aa16.53■□□□□ 0.24
MIR548A1HG-201ENST00000636739 PLPPR3Q6T4P5 718 aa16.5■□□□□ 0.23
MIR548A1HG-201ENST00000636739 ADRA2BP18089 450 aa16.46■□□□□ 0.23
MIR548A1HG-201ENST00000636739 MAPK8IP2Q13387 824 aaPredicted RBP15.23■□□□□ 0.03
MIR548A1HG-201ENST00000636739 DMRT2Q9Y5R5 561 aa14.98□□□□□ -0.01
MIR548A1HG-201ENST00000636739 SCAF1Q9H7N4 1312 aaKnown RBP14.8□□□□□ -0.04
MIR548A1HG-201ENST00000636739 PPP4R3CPQ6ZMV5 832 aa14.52□□□□□ -0.09
MIR548A1HG-201ENST00000636739 DCAF8L1A6NGE4 600 aa14.51□□□□□ -0.09
MIR548A1HG-201ENST00000636739 CACNB1Q02641 598 aaPredicted RBP14.46□□□□□ -0.09
MIR548A1HG-201ENST00000636739 HOXD11P31277 338 aaPredicted RBP14.32□□□□□ -0.12
MIR548A1HG-201ENST00000636739 CNKSR2Q8WXI2 1034 aa14.22□□□□□ -0.13
MIR548A1HG-201ENST00000636739 RNF39Q9H2S5 420 aa14.19□□□□□ -0.14
MIR548A1HG-201ENST00000636739 RNF216Q9NWF9 866 aaPredicted RBP14.14□□□□□ -0.15
MIR548A1HG-201ENST00000636739 C1QBPQ07021 282 aaKnown RBP13.88□□□□□ -0.19
MIR548A1HG-201ENST00000636739 NCBP3Q53F19 620 aaKnown RBP13.76□□□□□ -0.21
MIR548A1HG-201ENST00000636739 NPM3O75607 178 aaKnown RBP13.71□□□□□ -0.21
MIR548A1HG-201ENST00000636739 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.7□□□□□ -0.22
MIR548A1HG-201ENST00000636739 DNAJC5BQ9UF47 199 aa13.69□□□□□ -0.22
MIR548A1HG-201ENST00000636739 U3KPZ7 1027 aaPredicted RBP13.43□□□□□ -0.26
MIR548A1HG-201ENST00000636739 SPINK5Q9NQ38 1064 aaPredicted RBP13.37□□□□□ -0.27
MIR548A1HG-201ENST00000636739 KCNA4P22459 653 aa13.31□□□□□ -0.28
MIR548A1HG-201ENST00000636739 CAPN15O75808 1086 aa13.3□□□□□ -0.28
MIR548A1HG-201ENST00000636739 DSG3P32926 999 aa13.25□□□□□ -0.29
MIR548A1HG-201ENST00000636739 SLC4A2P04920 1241 aa13.19□□□□□ -0.3
MIR548A1HG-201ENST00000636739 TRHP20396 242 aaPredicted RBP13.06□□□□□ -0.32
MIR548A1HG-201ENST00000636739 ABCB7O75027 752 aa13.05□□□□□ -0.32
MIR548A1HG-201ENST00000636739 POTEHQ6S545 545 aa13.02□□□□□ -0.33
MIR548A1HG-201ENST00000636739 ZNF219Q9P2Y4 722 aaPredicted RBP12.85□□□□□ -0.35
MIR548A1HG-201ENST00000636739 APLP2Q06481 763 aa12.77□□□□□ -0.37
MIR548A1HG-201ENST00000636739 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.75□□□□□ -0.37
MIR548A1HG-201ENST00000636739 HNRNPUL2Q1KMD3 747 aaKnown RBP12.75□□□□□ -0.37
MIR548A1HG-201ENST00000636739 SAMD1Q6SPF0 538 aaPredicted RBP12.72□□□□□ -0.37
MIR548A1HG-201ENST00000636739 POLA2Q14181 598 aa12.62□□□□□ -0.39
MIR548A1HG-201ENST00000636739 MYCNP04198 464 aaPredicted RBP12.58□□□□□ -0.4
MIR548A1HG-201ENST00000636739 ATF5Q9Y2D1 282 aaPredicted RBP12.52□□□□□ -0.41
MIR548A1HG-201ENST00000636739 RBM42Q9BTD8 480 aaKnown RBP12.49□□□□□ -0.41
MIR548A1HG-201ENST00000636739 CHRDL2Q6WN34 429 aa12.44□□□□□ -0.42
MIR548A1HG-201ENST00000636739 SLC4A1APQ9BWU0 796 aaKnown RBP12.44□□□□□ -0.42
MIR548A1HG-201ENST00000636739 FOXD4L1Q9NU39 408 aa12.37□□□□□ -0.43
MIR548A1HG-201ENST00000636739 ZBTB22O15209 634 aa12.28□□□□□ -0.44
MIR548A1HG-201ENST00000636739 OSCARQ8IYS5 282 aa12.26□□□□□ -0.45
MIR548A1HG-201ENST00000636739 AKT1S1Q96B36 256 aa12.21□□□□□ -0.45
MIR548A1HG-201ENST00000636739 REM2Q8IYK8 340 aaPredicted RBP12.18□□□□□ -0.46
MIR548A1HG-201ENST00000636739 PIP4P2Q8N4L2 257 aa12.13□□□□□ -0.47
MIR548A1HG-201ENST00000636739 ZBTB12Q9Y330 459 aaPredicted RBP12.13□□□□□ -0.47
MIR548A1HG-201ENST00000636739 PITPNM1O00562 1244 aa12.08□□□□□ -0.48
MIR548A1HG-201ENST00000636739 SP7Q8TDD2 431 aaPredicted RBP12.07□□□□□ -0.48
MIR548A1HG-201ENST00000636739 HAX1O00165 279 aa11.97□□□□□ -0.49
MIR548A1HG-201ENST00000636739 FXR2P51116 673 aaKnown RBP eCLIP11.96□□□□□ -0.49
MIR548A1HG-201ENST00000636739 EVX2Q03828 476 aa11.93□□□□□ -0.5
MIR548A1HG-201ENST00000636739 ATXN8OSP0DMR3 200 aa11.89□□□□□ -0.51
MIR548A1HG-201ENST00000636739 MKRN4PQ13434 485 aaPredicted RBP11.88□□□□□ -0.51
MIR548A1HG-201ENST00000636739 FBLN2P98095 1184 aa11.83□□□□□ -0.52
MIR548A1HG-201ENST00000636739 SPDYE2BA6NHP3 402 aa11.82□□□□□ -0.52
MIR548A1HG-201ENST00000636739 SPDYE6P0CI01 402 aa11.82□□□□□ -0.52
MIR548A1HG-201ENST00000636739 SPDYE2Q495Y8 402 aa11.82□□□□□ -0.52
MIR548A1HG-201ENST00000636739 CLEC11AQ9Y240 323 aa11.82□□□□□ -0.52
MIR548A1HG-201ENST00000636739 PRKAR2AP13861 404 aaKnown RBP11.76□□□□□ -0.53
MIR548A1HG-201ENST00000636739 ZNF692Q9BU19 519 aaPredicted RBP11.73□□□□□ -0.53
MIR548A1HG-201ENST00000636739 CHADLQ6NUI6 762 aa11.69□□□□□ -0.54
MIR548A1HG-201ENST00000636739 SPDYE1Q8NFV5 336 aaPredicted RBP11.68□□□□□ -0.54
MIR548A1HG-201ENST00000636739 SSUH2Q9Y2M2 353 aa11.68□□□□□ -0.54
MIR548A1HG-201ENST00000636739 C19orf67A6NJJ6 358 aa11.6□□□□□ -0.55
MIR548A1HG-201ENST00000636739 PABPN1Q86U42 306 aaKnown RBP eCLIP11.58□□□□□ -0.56
MIR548A1HG-201ENST00000636739 GABBR2O75899 941 aa11.53□□□□□ -0.56
MIR548A1HG-201ENST00000636739 PRR29P0C7W0 189 aa11.51□□□□□ -0.57
MIR548A1HG-201ENST00000636739 CSRNP3Q8WYN3 585 aa11.45□□□□□ -0.58
MIR548A1HG-201ENST00000636739 CD44P16070 742 aaKnown RBP11.36□□□□□ -0.59
MIR548A1HG-201ENST00000636739 FARP1Q9Y4F1 1045 aaPredicted RBP11.36□□□□□ -0.59
MIR548A1HG-201ENST00000636739 POTEIP0CG38 1075 aa11.35□□□□□ -0.59
MIR548A1HG-201ENST00000636739 LHX8Q68G74 356 aa11.34□□□□□ -0.59
MIR548A1HG-201ENST00000636739 EHMT2Q96KQ7 1210 aa11.25□□□□□ -0.61
MIR548A1HG-201ENST00000636739 CREBZFQ9NS37 354 aa11.22□□□□□ -0.61
MIR548A1HG-201ENST00000636739 ZRANB1Q9UGI0 708 aa11.19□□□□□ -0.62
MIR548A1HG-201ENST00000636739 SPDYE4A6NLX3 237 aa11.13□□□□□ -0.63
MIR548A1HG-201ENST00000636739 GALR2O43603 387 aaPredicted RBP11.12□□□□□ -0.63
MIR548A1HG-201ENST00000636739 DCBLD2Q96PD2 775 aa11.12□□□□□ -0.63
MIR548A1HG-201ENST00000636739 ZNF579Q8NAF0 562 aaKnown RBP11.11□□□□□ -0.63
MIR548A1HG-201ENST00000636739 PHF12Q96QT6 1004 aa11.08□□□□□ -0.64
MIR548A1HG-201ENST00000636739 STAG3Q9UJ98 1225 aa11.04□□□□□ -0.64
MIR548A1HG-201ENST00000636739 POTEB2H3BUK9 544 aa11□□□□□ -0.65
MIR548A1HG-201ENST00000636739 MNX1P50219 401 aaPredicted RBP10.99□□□□□ -0.65
MIR548A1HG-201ENST00000636739 CLCN6P51797 869 aa10.99□□□□□ -0.65
MIR548A1HG-201ENST00000636739 PELP1Q8IZL8 1130 aaKnown RBP10.96□□□□□ -0.65
MIR548A1HG-201ENST00000636739 OTUD5Q96G74 571 aa10.94□□□□□ -0.66
MIR548A1HG-201ENST00000636739 PAK3O75914 559 aaPredicted RBP10.91□□□□□ -0.66
MIR548A1HG-201ENST00000636739 PLSCR2Q9NRY7 297 aa10.89□□□□□ -0.67
MIR548A1HG-201ENST00000636739 MS4A3Q96HJ5 214 aa10.88□□□□□ -0.67
MIR548A1HG-201ENST00000636739 NPM1P06748 294 aaKnown RBP eCLIP10.87□□□□□ -0.67
MIR548A1HG-201ENST00000636739 TSPYL2Q9H2G4 693 aaPredicted RBP10.85□□□□□ -0.67
MIR548A1HG-201ENST00000636739 POTEJP0CG39 1038 aa10.8□□□□□ -0.68
MIR548A1HG-201ENST00000636739 ATMINO43313 823 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms