RNA–Protein interactions for RNA: ENST00000620033.4

CHL1-216, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 7,311 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-216ENST00000620033 DCAF8L2P0C7V8 631 aa8.49□□□□□ -1.05
CHL1-216ENST00000620033 FAM9AQ8IZU1 332 aaPredicted RBP7.89□□□□□ -1.15
CHL1-216ENST00000620033 MYT1LQ9UL68 1186 aa7.5□□□□□ -1.21
CHL1-216ENST00000620033 NISCHQ9Y2I1 1504 aa7.5□□□□□ -1.21
CHL1-216ENST00000620033 ATP1B4Q9UN42 357 aaPredicted RBP7.36□□□□□ -1.23
CHL1-216ENST00000620033 TTBK1Q5TCY1 1321 aaPredicted RBP7.35□□□□□ -1.23
CHL1-216ENST00000620033 EHMT2Q96KQ7 1210 aa7.33□□□□□ -1.24
CHL1-216ENST00000620033 APLP2Q06481 763 aa7.32□□□□□ -1.24
CHL1-216ENST00000620033 CHIC1Q5VXU3 224 aa7.32□□□□□ -1.24
CHL1-216ENST00000620033 RANGAP1P46060 587 aaPredicted RBP7.23□□□□□ -1.25
CHL1-216ENST00000620033 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.22□□□□□ -1.25
CHL1-216ENST00000620033 HNRNPUL2Q1KMD3 747 aaKnown RBP7.22□□□□□ -1.25
CHL1-216ENST00000620033 SUPT5HO00267 1087 aaKnown RBP7.21□□□□□ -1.25
CHL1-216ENST00000620033 SHROOM4Q9ULL8 1493 aa7.21□□□□□ -1.25
CHL1-216ENST00000620033 AEBP2Q6ZN18 517 aaPredicted RBP7.19□□□□□ -1.26
CHL1-216ENST00000620033 PLPPR3Q6T4P5 718 aa7.15□□□□□ -1.26
CHL1-216ENST00000620033 FBLN2P98095 1184 aa7.09□□□□□ -1.27
CHL1-216ENST00000620033 BCANQ96GW7 911 aa7.09□□□□□ -1.27
CHL1-216ENST00000620033 ESF1Q9H501 851 aaKnown RBP7.06□□□□□ -1.28
CHL1-216ENST00000620033 SLC4A1APQ9BWU0 796 aaKnown RBP7.02□□□□□ -1.29
CHL1-216ENST00000620033 TRHP20396 242 aaPredicted RBP7.01□□□□□ -1.29
CHL1-216ENST00000620033 ABCC9O60706 1549 aa7□□□□□ -1.29
CHL1-216ENST00000620033 NPM1P06748 294 aaKnown RBP eCLIP6.98□□□□□ -1.29
CHL1-216ENST00000620033 PABPN1Q86U42 306 aaKnown RBP eCLIP6.98□□□□□ -1.29
CHL1-216ENST00000620033 TRIM41Q8WV44 630 aa6.95□□□□□ -1.3
CHL1-216ENST00000620033 SCAF1Q9H7N4 1312 aaKnown RBP6.88□□□□□ -1.31
CHL1-216ENST00000620033 SLC24A1O60721 1099 aa6.88□□□□□ -1.31
CHL1-216ENST00000620033 UBTFP17480 764 aaKnown RBP6.87□□□□□ -1.31
CHL1-216ENST00000620033 A0A0G2JS52 829 aa6.85□□□□□ -1.31
CHL1-216ENST00000620033 STAG3Q9UJ98 1225 aa6.84□□□□□ -1.31
CHL1-216ENST00000620033 ARID4BQ4LE39 1312 aaPredicted RBP6.81□□□□□ -1.32
CHL1-216ENST00000620033 SENP3Q9H4L4 574 aaPredicted RBP6.81□□□□□ -1.32
CHL1-216ENST00000620033 DCAF8L1A6NGE4 600 aa6.79□□□□□ -1.32
CHL1-216ENST00000620033 POLR3GLQ9BT43 218 aa6.79□□□□□ -1.32
CHL1-216ENST00000620033 HAP1P54257 671 aaPredicted RBP6.77□□□□□ -1.33
CHL1-216ENST00000620033 C14orf37Q86TY3 774 aa6.76□□□□□ -1.33
CHL1-216ENST00000620033 MYT1Q01538 1121 aa6.75□□□□□ -1.33
CHL1-216ENST00000620033 ERCC6Q03468 1493 aa6.75□□□□□ -1.33
CHL1-216ENST00000620033 PHF23Q9BUL5 403 aaPredicted RBP6.73□□□□□ -1.33
CHL1-216ENST00000620033 PELP1Q8IZL8 1130 aaKnown RBP6.7□□□□□ -1.34
CHL1-216ENST00000620033 FOXD1Q16676 465 aa6.68□□□□□ -1.34
CHL1-216ENST00000620033 PLEKHG5O94827 1062 aa6.67□□□□□ -1.34
CHL1-216ENST00000620033 ITGAEP38570 1179 aa6.66□□□□□ -1.34
CHL1-216ENST00000620033 ZBTB7CA1YPR0 619 aa6.66□□□□□ -1.34
CHL1-216ENST00000620033 ARID3CA6NKF2 412 aa6.64□□□□□ -1.35
CHL1-216ENST00000620033 CHGAP10645 457 aaKnown RBP6.64□□□□□ -1.35
CHL1-216ENST00000620033 CHMP7Q8WUX9 453 aaPredicted RBP6.62□□□□□ -1.35
CHL1-216ENST00000620033 NPM2Q86SE8 214 aaKnown RBP6.61□□□□□ -1.35
CHL1-216ENST00000620033 CNGB1Q14028 1251 aaPredicted RBP6.61□□□□□ -1.35
CHL1-216ENST00000620033 MEX3CQ5U5Q3 659 aaKnown RBP6.6□□□□□ -1.35
CHL1-216ENST00000620033 NPHP1O15259 732 aa6.6□□□□□ -1.35
CHL1-216ENST00000620033 NEFMP07197 916 aa6.6□□□□□ -1.35
CHL1-216ENST00000620033 ZNF777Q9ULD5 760 aaPredicted RBP6.59□□□□□ -1.35
CHL1-216ENST00000620033 TRIM52Q96A61 297 aa6.59□□□□□ -1.35
CHL1-216ENST00000620033 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.58□□□□□ -1.36
CHL1-216ENST00000620033 PPP1R15AO75807 674 aaPredicted RBP6.58□□□□□ -1.36
CHL1-216ENST00000620033 ZBTB47Q9UFB7 747 aaPredicted RBP6.54□□□□□ -1.36
CHL1-216ENST00000620033 FAM50AQ14320 339 aaKnown RBP6.54□□□□□ -1.36
CHL1-216ENST00000620033 CDK11AQ9UQ88 783 aaPredicted RBP6.52□□□□□ -1.37
CHL1-216ENST00000620033 CCDC9Q9Y3X0 531 aaKnown RBP6.52□□□□□ -1.37
CHL1-216ENST00000620033 KCNH8Q96L42 1107 aa6.5□□□□□ -1.37
CHL1-216ENST00000620033 ARXQ96QS3 562 aa6.49□□□□□ -1.37
CHL1-216ENST00000620033 LMOD2Q6P5Q4 547 aa6.49□□□□□ -1.37
CHL1-216ENST00000620033 ZNF326Q5BKZ1 582 aaKnown RBP6.49□□□□□ -1.37
CHL1-216ENST00000620033 BCL11AQ9H165 835 aa6.48□□□□□ -1.37
CHL1-216ENST00000620033 MLECQ14165 292 aa6.47□□□□□ -1.37
CHL1-216ENST00000620033 ERICH6Q7L0X2 663 aa6.47□□□□□ -1.37
CHL1-216ENST00000620033 CCER1Q8TC90 406 aaPredicted RBP6.47□□□□□ -1.37
CHL1-216ENST00000620033 PCGF6Q9BYE7 350 aa6.47□□□□□ -1.37
CHL1-216ENST00000620033 P3H3Q8IVL6 736 aa6.46□□□□□ -1.38
CHL1-216ENST00000620033 KLHL34Q8N239 644 aa6.44□□□□□ -1.38
CHL1-216ENST00000620033 TMX4Q9H1E5 349 aaPredicted RBP6.43□□□□□ -1.38
CHL1-216ENST00000620033 KRI1Q8N9T8 703 aaKnown RBP6.42□□□□□ -1.38
CHL1-216ENST00000620033 SF3B2Q13435 895 aaKnown RBP6.42□□□□□ -1.38
CHL1-216ENST00000620033 DAXXQ9UER7 740 aaPredicted RBP6.42□□□□□ -1.38
CHL1-216ENST00000620033 RB1CC1Q8TDY2 1594 aa6.42□□□□□ -1.38
CHL1-216ENST00000620033 SCRIBQ14160 1630 aa6.38□□□□□ -1.39
CHL1-216ENST00000620033 CLSPNQ9HAW4 1339 aa6.38□□□□□ -1.39
CHL1-216ENST00000620033 NEFLP07196 543 aa6.37□□□□□ -1.39
CHL1-216ENST00000620033 PPARGC1BQ86YN6 1023 aaKnown RBP6.37□□□□□ -1.39
CHL1-216ENST00000620033 MSH5O43196 834 aa6.37□□□□□ -1.39
CHL1-216ENST00000620033 HDGFP51858 240 aaKnown RBP6.36□□□□□ -1.39
CHL1-216ENST00000620033 CANXP27824 592 aaKnown RBP6.35□□□□□ -1.39
CHL1-216ENST00000620033 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.35□□□□□ -1.39
CHL1-216ENST00000620033 TULP1O00294 542 aaPredicted RBP6.34□□□□□ -1.4
CHL1-216ENST00000620033 CYB5RLQ6IPT4 315 aa6.33□□□□□ -1.4
CHL1-216ENST00000620033 GOLGA2Q08379 1002 aa6.33□□□□□ -1.4
CHL1-216ENST00000620033 G3V3G9 751 aa6.32□□□□□ -1.4
CHL1-216ENST00000620033 DCAF8Q5TAQ9 597 aa6.32□□□□□ -1.4
CHL1-216ENST00000620033 OSCARQ8IYS5 282 aa6.29□□□□□ -1.4
CHL1-216ENST00000620033 TSPY4P0CV99 314 aa6.29□□□□□ -1.4
CHL1-216ENST00000620033 TSPY10P0CW01 314 aa6.29□□□□□ -1.4
CHL1-216ENST00000620033 PPP1R1BQ9UD71 204 aaPredicted RBP6.29□□□□□ -1.4
CHL1-216ENST00000620033 CFAP44Q96MT7 982 aa6.28□□□□□ -1.4
CHL1-216ENST00000620033 CDK11BP21127 795 aaKnown RBP6.28□□□□□ -1.4
CHL1-216ENST00000620033 NCBP3Q53F19 620 aaKnown RBP6.28□□□□□ -1.4
CHL1-216ENST00000620033 EIF4G2P78344 907 aaKnown RBP eCLIP6.28□□□□□ -1.4
CHL1-216ENST00000620033 NEUROD1Q13562 356 aa6.28□□□□□ -1.4
CHL1-216ENST00000620033 PLEKHD1A6NEE1 506 aa6.27□□□□□ -1.4
CHL1-216ENST00000620033 CSB-PGBD3P0DP91 1061 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms