RNA–Protein interactions for RNA: ENST00000541404.1

LINC02390-201, Transcript of long intergenic non-protein coding RNA 2390, humanhuman

TSL 4 BASIC

Gene LINC02390, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02390-201ENST00000541404 AEBP2Q6ZN18 517 aaPredicted RBP20.21■□□□□ 0.83
LINC02390-201ENST00000541404 CHIC1Q5VXU3 224 aa19.26■□□□□ 0.67
LINC02390-201ENST00000541404 SENP3Q9H4L4 574 aaPredicted RBP17.22■□□□□ 0.35
LINC02390-201ENST00000541404 PHF23Q9BUL5 403 aaPredicted RBP17.03■□□□□ 0.32
LINC02390-201ENST00000541404 FOXD1Q16676 465 aa16.06■□□□□ 0.16
LINC02390-201ENST00000541404 POTEDQ86YR6 584 aa15.63■□□□□ 0.09
LINC02390-201ENST00000541404 PLPPR3Q6T4P5 718 aa15.45■□□□□ 0.06
LINC02390-201ENST00000541404 ADRA2BP18089 450 aa15.1■□□□□ 0.01
LINC02390-201ENST00000541404 PPP6R1Q9UPN7 881 aa15.1■□□□□ 0.01
LINC02390-201ENST00000541404 PIAS4Q8N2W9 510 aaPredicted RBP15.08■□□□□ 0
LINC02390-201ENST00000541404 MSH5O43196 834 aa14.97□□□□□ -0.01
LINC02390-201ENST00000541404 MAPK8IP2Q13387 824 aaPredicted RBP13.84□□□□□ -0.19
LINC02390-201ENST00000541404 SCAF1Q9H7N4 1312 aaKnown RBP13.77□□□□□ -0.21
LINC02390-201ENST00000541404 DMRT2Q9Y5R5 561 aa13.65□□□□□ -0.22
LINC02390-201ENST00000541404 PPP4R3CPQ6ZMV5 832 aa13.58□□□□□ -0.24
LINC02390-201ENST00000541404 DCAF8L1A6NGE4 600 aa13.27□□□□□ -0.29
LINC02390-201ENST00000541404 CNKSR2Q8WXI2 1034 aa13.27□□□□□ -0.29
LINC02390-201ENST00000541404 HOXD11P31277 338 aaPredicted RBP13.16□□□□□ -0.3
LINC02390-201ENST00000541404 RNF216Q9NWF9 866 aaPredicted RBP13.12□□□□□ -0.31
LINC02390-201ENST00000541404 NCBP3Q53F19 620 aaKnown RBP13.08□□□□□ -0.32
LINC02390-201ENST00000541404 CACNB1Q02641 598 aaPredicted RBP13.03□□□□□ -0.32
LINC02390-201ENST00000541404 NPM3O75607 178 aaKnown RBP12.89□□□□□ -0.35
LINC02390-201ENST00000541404 RNF39Q9H2S5 420 aa12.78□□□□□ -0.36
LINC02390-201ENST00000541404 KCNA4P22459 653 aa12.75□□□□□ -0.37
LINC02390-201ENST00000541404 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.66□□□□□ -0.38
LINC02390-201ENST00000541404 C1QBPQ07021 282 aaKnown RBP12.59□□□□□ -0.39
LINC02390-201ENST00000541404 DNAJC5BQ9UF47 199 aa12.59□□□□□ -0.39
LINC02390-201ENST00000541404 U3KPZ7 1027 aaPredicted RBP12.34□□□□□ -0.43
LINC02390-201ENST00000541404 SLC4A2P04920 1241 aa12.26□□□□□ -0.45
LINC02390-201ENST00000541404 CAPN15O75808 1086 aa12.2□□□□□ -0.46
LINC02390-201ENST00000541404 SPINK5Q9NQ38 1064 aaPredicted RBP12.18□□□□□ -0.46
LINC02390-201ENST00000541404 POTEHQ6S545 545 aa12.08□□□□□ -0.48
LINC02390-201ENST00000541404 SLC4A1APQ9BWU0 796 aaKnown RBP12.07□□□□□ -0.48
LINC02390-201ENST00000541404 TRHP20396 242 aaPredicted RBP12.03□□□□□ -0.48
LINC02390-201ENST00000541404 DSG3P32926 999 aa12.02□□□□□ -0.49
LINC02390-201ENST00000541404 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.01□□□□□ -0.49
LINC02390-201ENST00000541404 HNRNPUL2Q1KMD3 747 aaKnown RBP12.01□□□□□ -0.49
LINC02390-201ENST00000541404 APLP2Q06481 763 aa12□□□□□ -0.49
LINC02390-201ENST00000541404 SAMD1Q6SPF0 538 aaPredicted RBP11.95□□□□□ -0.5
LINC02390-201ENST00000541404 ABCB7O75027 752 aa11.93□□□□□ -0.5
LINC02390-201ENST00000541404 ZNF219Q9P2Y4 722 aaPredicted RBP11.92□□□□□ -0.5
LINC02390-201ENST00000541404 MYCNP04198 464 aaPredicted RBP11.91□□□□□ -0.5
LINC02390-201ENST00000541404 FOXD4L1Q9NU39 408 aa11.84□□□□□ -0.51
LINC02390-201ENST00000541404 ZBTB22O15209 634 aa11.7□□□□□ -0.54
LINC02390-201ENST00000541404 POLA2Q14181 598 aa11.7□□□□□ -0.54
LINC02390-201ENST00000541404 ATF5Q9Y2D1 282 aaPredicted RBP11.67□□□□□ -0.54
LINC02390-201ENST00000541404 RBM42Q9BTD8 480 aaKnown RBP11.45□□□□□ -0.58
LINC02390-201ENST00000541404 ATXN8OSP0DMR3 200 aa11.41□□□□□ -0.58
LINC02390-201ENST00000541404 ZBTB12Q9Y330 459 aaPredicted RBP11.39□□□□□ -0.59
LINC02390-201ENST00000541404 OSCARQ8IYS5 282 aa11.32□□□□□ -0.6
LINC02390-201ENST00000541404 EHMT2Q96KQ7 1210 aa11.27□□□□□ -0.61
LINC02390-201ENST00000541404 CSRNP3Q8WYN3 585 aa11.25□□□□□ -0.61
LINC02390-201ENST00000541404 FBLN2P98095 1184 aa11.21□□□□□ -0.61
LINC02390-201ENST00000541404 CHRDL2Q6WN34 429 aa11.2□□□□□ -0.62
LINC02390-201ENST00000541404 AKT1S1Q96B36 256 aa11.2□□□□□ -0.62
LINC02390-201ENST00000541404 REM2Q8IYK8 340 aaPredicted RBP11.13□□□□□ -0.63
LINC02390-201ENST00000541404 MKRN4PQ13434 485 aaPredicted RBP11.1□□□□□ -0.63
LINC02390-201ENST00000541404 SPDYE2BA6NHP3 402 aa11.04□□□□□ -0.64
LINC02390-201ENST00000541404 SPDYE6P0CI01 402 aa11.04□□□□□ -0.64
LINC02390-201ENST00000541404 SPDYE2Q495Y8 402 aa11.04□□□□□ -0.64
LINC02390-201ENST00000541404 PITPNM1O00562 1244 aa11.02□□□□□ -0.65
LINC02390-201ENST00000541404 ZNF692Q9BU19 519 aaPredicted RBP11□□□□□ -0.65
LINC02390-201ENST00000541404 SP7Q8TDD2 431 aaPredicted RBP10.99□□□□□ -0.65
LINC02390-201ENST00000541404 PIP4P2Q8N4L2 257 aa10.95□□□□□ -0.66
LINC02390-201ENST00000541404 CLEC11AQ9Y240 323 aa10.94□□□□□ -0.66
LINC02390-201ENST00000541404 SSUH2Q9Y2M2 353 aa10.88□□□□□ -0.67
LINC02390-201ENST00000541404 SPDYE1Q8NFV5 336 aaPredicted RBP10.86□□□□□ -0.67
LINC02390-201ENST00000541404 FXR2P51116 673 aaKnown RBP eCLIP10.85□□□□□ -0.67
LINC02390-201ENST00000541404 PABPN1Q86U42 306 aaKnown RBP eCLIP10.85□□□□□ -0.67
LINC02390-201ENST00000541404 HAX1O00165 279 aa10.79□□□□□ -0.68
LINC02390-201ENST00000541404 PRKAR2AP13861 404 aaKnown RBP10.77□□□□□ -0.69
LINC02390-201ENST00000541404 PRR29P0C7W0 189 aa10.72□□□□□ -0.69
LINC02390-201ENST00000541404 CHADLQ6NUI6 762 aa10.7□□□□□ -0.7
LINC02390-201ENST00000541404 SPDYE4A6NLX3 237 aa10.67□□□□□ -0.7
LINC02390-201ENST00000541404 EVX2Q03828 476 aa10.62□□□□□ -0.71
LINC02390-201ENST00000541404 C19orf67A6NJJ6 358 aa10.51□□□□□ -0.73
LINC02390-201ENST00000541404 STAG3Q9UJ98 1225 aa10.51□□□□□ -0.73
LINC02390-201ENST00000541404 FARP1Q9Y4F1 1045 aaPredicted RBP10.49□□□□□ -0.73
LINC02390-201ENST00000541404 CD44P16070 742 aaKnown RBP10.43□□□□□ -0.74
LINC02390-201ENST00000541404 CREBZFQ9NS37 354 aa10.42□□□□□ -0.74
LINC02390-201ENST00000541404 GABBR2O75899 941 aa10.38□□□□□ -0.75
LINC02390-201ENST00000541404 NISCHQ9Y2I1 1504 aa10.35□□□□□ -0.75
LINC02390-201ENST00000541404 ZRANB1Q9UGI0 708 aa10.32□□□□□ -0.76
LINC02390-201ENST00000541404 PROM2Q8N271 834 aa10.29□□□□□ -0.76
LINC02390-201ENST00000541404 LHX8Q68G74 356 aa10.28□□□□□ -0.76
LINC02390-201ENST00000541404 NPM1P06748 294 aaKnown RBP eCLIP10.26□□□□□ -0.77
LINC02390-201ENST00000541404 FKBP8Q14318 412 aa10.26□□□□□ -0.77
LINC02390-201ENST00000541404 PAK3O75914 559 aaPredicted RBP10.24□□□□□ -0.77
LINC02390-201ENST00000541404 MNX1P50219 401 aaPredicted RBP10.22□□□□□ -0.77
LINC02390-201ENST00000541404 MIER1Q8N108 512 aa10.21□□□□□ -0.77
LINC02390-201ENST00000541404 ZNF579Q8NAF0 562 aaKnown RBP10.2□□□□□ -0.78
LINC02390-201ENST00000541404 PLEKHG5O94827 1062 aa10.18□□□□□ -0.78
LINC02390-201ENST00000541404 PHF12Q96QT6 1004 aa10.17□□□□□ -0.78
LINC02390-201ENST00000541404 PLSCR2Q9NRY7 297 aa10.17□□□□□ -0.78
LINC02390-201ENST00000541404 DCBLD2Q96PD2 775 aa10.16□□□□□ -0.78
LINC02390-201ENST00000541404 CLCN6P51797 869 aa10.15□□□□□ -0.78
LINC02390-201ENST00000541404 TSPYL2Q9H2G4 693 aaPredicted RBP10.15□□□□□ -0.78
LINC02390-201ENST00000541404 PLCD3Q8N3E9 789 aa10.14□□□□□ -0.79
LINC02390-201ENST00000541404 GALR2O43603 387 aaPredicted RBP10.13□□□□□ -0.79
LINC02390-201ENST00000541404 POTEIP0CG38 1075 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms