RNA–Protein interactions for RNA: ENST00000431405.1

USP9YP31-201, Transcript of USP9Y pseudogene 31, humanhuman

BASIC

Gene USP9YP31, Length 881 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9YP31-201ENST00000431405 AEBP2Q6ZN18 517 aaPredicted RBP27.13■■□□□ 1.93
USP9YP31-201ENST00000431405 CHIC1Q5VXU3 224 aa25.28■■□□□ 1.64
USP9YP31-201ENST00000431405 SENP3Q9H4L4 574 aaPredicted RBP23.2■■□□□ 1.3
USP9YP31-201ENST00000431405 PHF23Q9BUL5 403 aaPredicted RBP22.8■■□□□ 1.24
USP9YP31-201ENST00000431405 FOXD1Q16676 465 aa21.71■■□□□ 1.07
USP9YP31-201ENST00000431405 POTEDQ86YR6 584 aa21.06■□□□□ 0.96
USP9YP31-201ENST00000431405 MSH5O43196 834 aa20.53■□□□□ 0.88
USP9YP31-201ENST00000431405 PIAS4Q8N2W9 510 aaPredicted RBP20.08■□□□□ 0.81
USP9YP31-201ENST00000431405 PLPPR3Q6T4P5 718 aa20■□□□□ 0.79
USP9YP31-201ENST00000431405 PPP6R1Q9UPN7 881 aa19.84■□□□□ 0.77
USP9YP31-201ENST00000431405 ADRA2BP18089 450 aa19.7■□□□□ 0.74
USP9YP31-201ENST00000431405 DMRT2Q9Y5R5 561 aa18.34■□□□□ 0.53
USP9YP31-201ENST00000431405 MAPK8IP2Q13387 824 aaPredicted RBP18.27■□□□□ 0.52
USP9YP31-201ENST00000431405 SCAF1Q9H7N4 1312 aaKnown RBP18.01■□□□□ 0.47
USP9YP31-201ENST00000431405 CACNB1Q02641 598 aaPredicted RBP17.91■□□□□ 0.46
USP9YP31-201ENST00000431405 RNF39Q9H2S5 420 aa17.5■□□□□ 0.39
USP9YP31-201ENST00000431405 PPP4R3CPQ6ZMV5 832 aa17.49■□□□□ 0.39
USP9YP31-201ENST00000431405 HOXD11P31277 338 aaPredicted RBP17.45■□□□□ 0.38
USP9YP31-201ENST00000431405 DCAF8L1A6NGE4 600 aa17.43■□□□□ 0.38
USP9YP31-201ENST00000431405 CNKSR2Q8WXI2 1034 aa17.23■□□□□ 0.35
USP9YP31-201ENST00000431405 C1QBPQ07021 282 aaKnown RBP17.19■□□□□ 0.34
USP9YP31-201ENST00000431405 RNF216Q9NWF9 866 aaPredicted RBP17.14■□□□□ 0.33
USP9YP31-201ENST00000431405 DNAJC5BQ9UF47 199 aa17.03■□□□□ 0.32
USP9YP31-201ENST00000431405 NCBP3Q53F19 620 aaKnown RBP16.77■□□□□ 0.28
USP9YP31-201ENST00000431405 NPM3O75607 178 aaKnown RBP16.53■□□□□ 0.24
USP9YP31-201ENST00000431405 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.49■□□□□ 0.23
USP9YP31-201ENST00000431405 POTEHQ6S545 545 aa16.36■□□□□ 0.21
USP9YP31-201ENST00000431405 U3KPZ7 1027 aaPredicted RBP16.18■□□□□ 0.18
USP9YP31-201ENST00000431405 DSG3P32926 999 aa16.16■□□□□ 0.18
USP9YP31-201ENST00000431405 SPINK5Q9NQ38 1064 aaPredicted RBP16.07■□□□□ 0.16
USP9YP31-201ENST00000431405 KCNA4P22459 653 aa16.03■□□□□ 0.16
USP9YP31-201ENST00000431405 CAPN15O75808 1086 aa16.01■□□□□ 0.15
USP9YP31-201ENST00000431405 SLC4A2P04920 1241 aa15.86■□□□□ 0.13
USP9YP31-201ENST00000431405 APLP2Q06481 763 aa15.64■□□□□ 0.09
USP9YP31-201ENST00000431405 ZNF219Q9P2Y4 722 aaPredicted RBP15.62■□□□□ 0.09
USP9YP31-201ENST00000431405 TRHP20396 242 aaPredicted RBP15.61■□□□□ 0.09
USP9YP31-201ENST00000431405 ABCB7O75027 752 aa15.6■□□□□ 0.09
USP9YP31-201ENST00000431405 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.59■□□□□ 0.09
USP9YP31-201ENST00000431405 HNRNPUL2Q1KMD3 747 aaKnown RBP15.59■□□□□ 0.09
USP9YP31-201ENST00000431405 SAMD1Q6SPF0 538 aaPredicted RBP15.5■□□□□ 0.07
USP9YP31-201ENST00000431405 RBM42Q9BTD8 480 aaKnown RBP15.4■□□□□ 0.06
USP9YP31-201ENST00000431405 CHRDL2Q6WN34 429 aa15.31■□□□□ 0.04
USP9YP31-201ENST00000431405 MYCNP04198 464 aaPredicted RBP15.3■□□□□ 0.04
USP9YP31-201ENST00000431405 POLA2Q14181 598 aa15.11■□□□□ 0.01
USP9YP31-201ENST00000431405 SLC4A1APQ9BWU0 796 aaKnown RBP15.09■□□□□ 0.01
USP9YP31-201ENST00000431405 SP7Q8TDD2 431 aaPredicted RBP15.07■□□□□ 0
USP9YP31-201ENST00000431405 FOXD4L1Q9NU39 408 aa15.05■□□□□ -0
USP9YP31-201ENST00000431405 AKT1S1Q96B36 256 aa14.95□□□□□ -0.02
USP9YP31-201ENST00000431405 ATF5Q9Y2D1 282 aaPredicted RBP14.93□□□□□ -0.02
USP9YP31-201ENST00000431405 ZBTB12Q9Y330 459 aaPredicted RBP14.85□□□□□ -0.03
USP9YP31-201ENST00000431405 PIP4P2Q8N4L2 257 aa14.83□□□□□ -0.04
USP9YP31-201ENST00000431405 REM2Q8IYK8 340 aaPredicted RBP14.8□□□□□ -0.04
USP9YP31-201ENST00000431405 ZBTB22O15209 634 aa14.75□□□□□ -0.05
USP9YP31-201ENST00000431405 FXR2P51116 673 aaKnown RBP eCLIP14.68□□□□□ -0.06
USP9YP31-201ENST00000431405 HAX1O00165 279 aa14.65□□□□□ -0.06
USP9YP31-201ENST00000431405 PITPNM1O00562 1244 aa14.65□□□□□ -0.06
USP9YP31-201ENST00000431405 ATXN8OSP0DMR3 200 aa14.65□□□□□ -0.06
USP9YP31-201ENST00000431405 OSCARQ8IYS5 282 aa14.65□□□□□ -0.06
USP9YP31-201ENST00000431405 EVX2Q03828 476 aa14.5□□□□□ -0.09
USP9YP31-201ENST00000431405 SPDYE2BA6NHP3 402 aa14.38□□□□□ -0.11
USP9YP31-201ENST00000431405 SPDYE6P0CI01 402 aa14.38□□□□□ -0.11
USP9YP31-201ENST00000431405 SPDYE2Q495Y8 402 aa14.38□□□□□ -0.11
USP9YP31-201ENST00000431405 FBLN2P98095 1184 aa14.36□□□□□ -0.11
USP9YP31-201ENST00000431405 MKRN4PQ13434 485 aaPredicted RBP14.27□□□□□ -0.13
USP9YP31-201ENST00000431405 C19orf67A6NJJ6 358 aa14.23□□□□□ -0.13
USP9YP31-201ENST00000431405 PRKAR2AP13861 404 aaKnown RBP14.23□□□□□ -0.13
USP9YP31-201ENST00000431405 SSUH2Q9Y2M2 353 aa14.18□□□□□ -0.14
USP9YP31-201ENST00000431405 SPDYE1Q8NFV5 336 aaPredicted RBP14.15□□□□□ -0.14
USP9YP31-201ENST00000431405 GABBR2O75899 941 aa14.13□□□□□ -0.15
USP9YP31-201ENST00000431405 ZNF692Q9BU19 519 aaPredicted RBP14.11□□□□□ -0.15
USP9YP31-201ENST00000431405 LHX8Q68G74 356 aa14.1□□□□□ -0.15
USP9YP31-201ENST00000431405 CLEC11AQ9Y240 323 aa14.08□□□□□ -0.16
USP9YP31-201ENST00000431405 EHMT2Q96KQ7 1210 aa14.03□□□□□ -0.16
USP9YP31-201ENST00000431405 CHADLQ6NUI6 762 aa13.91□□□□□ -0.18
USP9YP31-201ENST00000431405 PABPN1Q86U42 306 aaKnown RBP eCLIP13.91□□□□□ -0.18
USP9YP31-201ENST00000431405 CSRNP3Q8WYN3 585 aa13.91□□□□□ -0.18
USP9YP31-201ENST00000431405 POTEIP0CG38 1075 aa13.87□□□□□ -0.19
USP9YP31-201ENST00000431405 PRR29P0C7W0 189 aa13.83□□□□□ -0.2
USP9YP31-201ENST00000431405 CD44P16070 742 aaKnown RBP13.74□□□□□ -0.21
USP9YP31-201ENST00000431405 CLCN6P51797 869 aa13.74□□□□□ -0.21
USP9YP31-201ENST00000431405 FARP1Q9Y4F1 1045 aaPredicted RBP13.7□□□□□ -0.22
USP9YP31-201ENST00000431405 PLSCR2Q9NRY7 297 aa13.59□□□□□ -0.23
USP9YP31-201ENST00000431405 ZNF579Q8NAF0 562 aaKnown RBP13.57□□□□□ -0.24
USP9YP31-201ENST00000431405 DCBLD2Q96PD2 775 aa13.56□□□□□ -0.24
USP9YP31-201ENST00000431405 STAG3Q9UJ98 1225 aa13.53□□□□□ -0.24
USP9YP31-201ENST00000431405 CREBZFQ9NS37 354 aa13.49□□□□□ -0.25
USP9YP31-201ENST00000431405 SPDYE4A6NLX3 237 aa13.47□□□□□ -0.25
USP9YP31-201ENST00000431405 OTUD5Q96G74 571 aa13.45□□□□□ -0.26
USP9YP31-201ENST00000431405 ZRANB1Q9UGI0 708 aa13.43□□□□□ -0.26
USP9YP31-201ENST00000431405 GALR2O43603 387 aaPredicted RBP13.4□□□□□ -0.26
USP9YP31-201ENST00000431405 POTEB2H3BUK9 544 aa13.39□□□□□ -0.27
USP9YP31-201ENST00000431405 POTEMA6NI47 508 aa13.29□□□□□ -0.28
USP9YP31-201ENST00000431405 MNX1P50219 401 aaPredicted RBP13.27□□□□□ -0.29
USP9YP31-201ENST00000431405 POTEGQ6S5H5 508 aa13.24□□□□□ -0.29
USP9YP31-201ENST00000431405 NPM1P06748 294 aaKnown RBP eCLIP13.22□□□□□ -0.29
USP9YP31-201ENST00000431405 PELP1Q8IZL8 1130 aaKnown RBP13.22□□□□□ -0.29
USP9YP31-201ENST00000431405 PROM2Q8N271 834 aa13.22□□□□□ -0.29
USP9YP31-201ENST00000431405 PHF12Q96QT6 1004 aa13.22□□□□□ -0.29
USP9YP31-201ENST00000431405 PAK3O75914 559 aaPredicted RBP13.21□□□□□ -0.29
USP9YP31-201ENST00000431405 PCDH10Q9P2E7 1040 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms