Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CYP46A1Q9Y6A2 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC22.9■■□□□ 1.26
CYP46A1Q9Y6A2 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC22.9■■□□□ 1.26
CYP46A1Q9Y6A2 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC22.9■■□□□ 1.26
CYP46A1Q9Y6A2 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC22.9■■□□□ 1.26
CYP46A1Q9Y6A2 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.26
CYP46A1Q9Y6A2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC22.89■■□□□ 1.26
CYP46A1Q9Y6A2 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
CYP46A1Q9Y6A2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
CYP46A1Q9Y6A2 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
CYP46A1Q9Y6A2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC22.89■■□□□ 1.26
CYP46A1Q9Y6A2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC22.89■■□□□ 1.25
CYP46A1Q9Y6A2 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CYP46A1Q9Y6A2 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
CYP46A1Q9Y6A2 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC22.89■■□□□ 1.25
CYP46A1Q9Y6A2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CYP46A1Q9Y6A2 KRT17P3-201ENST00000420566 1262 ntBASIC22.89■■□□□ 1.25
CYP46A1Q9Y6A2 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CYP46A1Q9Y6A2 AC026366.1-201ENST00000488803 879 ntBASIC22.89■■□□□ 1.25
CYP46A1Q9Y6A2 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CYP46A1Q9Y6A2 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
CYP46A1Q9Y6A2 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC22.89■■□□□ 1.25
CYP46A1Q9Y6A2 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC22.89■■□□□ 1.25
CYP46A1Q9Y6A2 AL049812.1-201ENST00000432563 2267 ntBASIC22.89■■□□□ 1.25
CYP46A1Q9Y6A2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CYP46A1Q9Y6A2 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC22.89■■□□□ 1.25
CYP46A1Q9Y6A2 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
CYP46A1Q9Y6A2 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
CYP46A1Q9Y6A2 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC22.89■■□□□ 1.25
CYP46A1Q9Y6A2 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
CYP46A1Q9Y6A2 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC22.89■■□□□ 1.25
CYP46A1Q9Y6A2 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC22.89■■□□□ 1.25
CYP46A1Q9Y6A2 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
CYP46A1Q9Y6A2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC22.88■■□□□ 1.25
CYP46A1Q9Y6A2 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC22.88■■□□□ 1.25
CYP46A1Q9Y6A2 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CYP46A1Q9Y6A2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CYP46A1Q9Y6A2 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC22.88■■□□□ 1.25
CYP46A1Q9Y6A2 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
CYP46A1Q9Y6A2 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CYP46A1Q9Y6A2 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CYP46A1Q9Y6A2 NBPF21P-201ENST00000425093 1451 ntBASIC22.88■■□□□ 1.25
CYP46A1Q9Y6A2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CYP46A1Q9Y6A2 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CYP46A1Q9Y6A2 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CYP46A1Q9Y6A2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CYP46A1Q9Y6A2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CYP46A1Q9Y6A2 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC22.88■■□□□ 1.25
CYP46A1Q9Y6A2 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
CYP46A1Q9Y6A2 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC22.88■■□□□ 1.25
CYP46A1Q9Y6A2 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
CYP46A1Q9Y6A2 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CYP46A1Q9Y6A2 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CYP46A1Q9Y6A2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CYP46A1Q9Y6A2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
CYP46A1Q9Y6A2 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC22.87■■□□□ 1.25
CYP46A1Q9Y6A2 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CYP46A1Q9Y6A2 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CYP46A1Q9Y6A2 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CYP46A1Q9Y6A2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
CYP46A1Q9Y6A2 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CYP46A1Q9Y6A2 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC22.87■■□□□ 1.25
CYP46A1Q9Y6A2 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
CYP46A1Q9Y6A2 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC22.87■■□□□ 1.25
CYP46A1Q9Y6A2 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
CYP46A1Q9Y6A2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CYP46A1Q9Y6A2 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CYP46A1Q9Y6A2 KRT18P6-201ENST00000555540 1265 ntBASIC22.87■■□□□ 1.25
CYP46A1Q9Y6A2 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC22.87■■□□□ 1.25
CYP46A1Q9Y6A2 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CYP46A1Q9Y6A2 MTDHP1-201ENST00000605323 784 ntBASIC22.87■■□□□ 1.25
CYP46A1Q9Y6A2 AC069544.1-201ENST00000609399 999 ntBASIC22.87■■□□□ 1.25
CYP46A1Q9Y6A2 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CYP46A1Q9Y6A2 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CYP46A1Q9Y6A2 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
CYP46A1Q9Y6A2 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
CYP46A1Q9Y6A2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC22.87■■□□□ 1.25
CYP46A1Q9Y6A2 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CYP46A1Q9Y6A2 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CYP46A1Q9Y6A2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC22.87■■□□□ 1.25
CYP46A1Q9Y6A2 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
CYP46A1Q9Y6A2 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CYP46A1Q9Y6A2 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CYP46A1Q9Y6A2 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
CYP46A1Q9Y6A2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CYP46A1Q9Y6A2 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC22.86■■□□□ 1.25
CYP46A1Q9Y6A2 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
CYP46A1Q9Y6A2 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC22.86■■□□□ 1.25
CYP46A1Q9Y6A2 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CYP46A1Q9Y6A2 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CYP46A1Q9Y6A2 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
CYP46A1Q9Y6A2 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC22.86■■□□□ 1.25
CYP46A1Q9Y6A2 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CYP46A1Q9Y6A2 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CYP46A1Q9Y6A2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
CYP46A1Q9Y6A2 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CYP46A1Q9Y6A2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC22.86■■□□□ 1.25
CYP46A1Q9Y6A2 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC22.86■■□□□ 1.25
CYP46A1Q9Y6A2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
CYP46A1Q9Y6A2 AC093503.3-201ENST00000624917 2352 ntBASIC22.86■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms