Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB1Q9Y5F3 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHB1Q9Y5F3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
PCDHB1Q9Y5F3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHB1Q9Y5F3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB1Q9Y5F3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB1Q9Y5F3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.32■□□□□ 0.68
PCDHB1Q9Y5F3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB1Q9Y5F3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB1Q9Y5F3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHB1Q9Y5F3 AC116562.4-201ENST00000641316 2276 ntBASIC19.32■□□□□ 0.68
PCDHB1Q9Y5F3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB1Q9Y5F3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB1Q9Y5F3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB1Q9Y5F3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB1Q9Y5F3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB1Q9Y5F3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB1Q9Y5F3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB1Q9Y5F3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.32■□□□□ 0.68
PCDHB1Q9Y5F3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PCDHB1Q9Y5F3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB1Q9Y5F3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PCDHB1Q9Y5F3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PCDHB1Q9Y5F3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB1Q9Y5F3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB1Q9Y5F3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB1Q9Y5F3 ARMC10P1-201ENST00000313754 855 ntBASIC19.31■□□□□ 0.68
PCDHB1Q9Y5F3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.31■□□□□ 0.68
PCDHB1Q9Y5F3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB1Q9Y5F3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB1Q9Y5F3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.31■□□□□ 0.68
PCDHB1Q9Y5F3 KRT18P16-201ENST00000510337 1294 ntBASIC19.31■□□□□ 0.68
PCDHB1Q9Y5F3 MIR6786-201ENST00000616843 113 ntBASIC19.31■□□□□ 0.68
PCDHB1Q9Y5F3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDHB1Q9Y5F3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB1Q9Y5F3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB1Q9Y5F3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB1Q9Y5F3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB1Q9Y5F3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB1Q9Y5F3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB1Q9Y5F3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PCDHB1Q9Y5F3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDHB1Q9Y5F3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDHB1Q9Y5F3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB1Q9Y5F3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PCDHB1Q9Y5F3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB1Q9Y5F3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB1Q9Y5F3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB1Q9Y5F3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB1Q9Y5F3 KRT16P5-201ENST00000455284 522 ntBASIC19.3■□□□□ 0.68
PCDHB1Q9Y5F3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHB1Q9Y5F3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.3■□□□□ 0.68
PCDHB1Q9Y5F3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHB1Q9Y5F3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHB1Q9Y5F3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB1Q9Y5F3 KRT8P8-201ENST00000434750 1448 ntBASIC19.3■□□□□ 0.68
PCDHB1Q9Y5F3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB1Q9Y5F3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHB1Q9Y5F3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB1Q9Y5F3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB1Q9Y5F3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
PCDHB1Q9Y5F3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB1Q9Y5F3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB1Q9Y5F3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB1Q9Y5F3 NBPF21P-201ENST00000425093 1451 ntBASIC19.29■□□□□ 0.68
PCDHB1Q9Y5F3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHB1Q9Y5F3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PCDHB1Q9Y5F3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHB1Q9Y5F3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PCDHB1Q9Y5F3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB1Q9Y5F3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHB1Q9Y5F3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PCDHB1Q9Y5F3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PCDHB1Q9Y5F3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB1Q9Y5F3 TUBB8P6-201ENST00000436895 1288 ntBASIC19.29■□□□□ 0.68
PCDHB1Q9Y5F3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB1Q9Y5F3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PCDHB1Q9Y5F3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.29■□□□□ 0.68
PCDHB1Q9Y5F3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHB1Q9Y5F3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
PCDHB1Q9Y5F3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
PCDHB1Q9Y5F3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB1Q9Y5F3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
PCDHB1Q9Y5F3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
PCDHB1Q9Y5F3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
PCDHB1Q9Y5F3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PCDHB1Q9Y5F3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
PCDHB1Q9Y5F3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB1Q9Y5F3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB1Q9Y5F3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB1Q9Y5F3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB1Q9Y5F3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB1Q9Y5F3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PCDHB1Q9Y5F3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHB1Q9Y5F3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHB1Q9Y5F3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB1Q9Y5F3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PCDHB1Q9Y5F3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB1Q9Y5F3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB1Q9Y5F3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms