Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 HLA-G-202ENST00000376815 851 ntBASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 HLA-G-203ENST00000376818 1127 ntBASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 MCRIP2P1-201ENST00000394346 511 ntBASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 AL359736.2-201ENST00000621992 437 ntBASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.43■□□□□ 0.06
LSM4Q9Y4Z0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LSM4Q9Y4Z0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.42■□□□□ 0.06
LSM4Q9Y4Z0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
LSM4Q9Y4Z0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LSM4Q9Y4Z0 AL161938.1-201ENST00000569833 2180 ntBASIC15.42■□□□□ 0.06
LSM4Q9Y4Z0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
LSM4Q9Y4Z0 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LSM4Q9Y4Z0 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.42■□□□□ 0.06
LSM4Q9Y4Z0 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.42■□□□□ 0.06
LSM4Q9Y4Z0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
LSM4Q9Y4Z0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LSM4Q9Y4Z0 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
LSM4Q9Y4Z0 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC15.42■□□□□ 0.06
LSM4Q9Y4Z0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
LSM4Q9Y4Z0 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.42■□□□□ 0.06
LSM4Q9Y4Z0 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LSM4Q9Y4Z0 RHOD-202ENST00000532559 538 ntTSL 3 BASIC15.42■□□□□ 0.06
LSM4Q9Y4Z0 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC15.42■□□□□ 0.06
LSM4Q9Y4Z0 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC15.42■□□□□ 0.06
LSM4Q9Y4Z0 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC15.42■□□□□ 0.06
LSM4Q9Y4Z0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LSM4Q9Y4Z0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LSM4Q9Y4Z0 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.42■□□□□ 0.06
LSM4Q9Y4Z0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LSM4Q9Y4Z0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
LSM4Q9Y4Z0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LSM4Q9Y4Z0 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LSM4Q9Y4Z0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LSM4Q9Y4Z0 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
LSM4Q9Y4Z0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC15.42■□□□□ 0.06
LSM4Q9Y4Z0 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
LSM4Q9Y4Z0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LSM4Q9Y4Z0 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LSM4Q9Y4Z0 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
LSM4Q9Y4Z0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LSM4Q9Y4Z0 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
LSM4Q9Y4Z0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
LSM4Q9Y4Z0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LSM4Q9Y4Z0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LSM4Q9Y4Z0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LSM4Q9Y4Z0 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
LSM4Q9Y4Z0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LSM4Q9Y4Z0 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LSM4Q9Y4Z0 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC15.41■□□□□ 0.06
LSM4Q9Y4Z0 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LSM4Q9Y4Z0 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
LSM4Q9Y4Z0 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LSM4Q9Y4Z0 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LSM4Q9Y4Z0 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
LSM4Q9Y4Z0 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.41■□□□□ 0.06
LSM4Q9Y4Z0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LSM4Q9Y4Z0 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LSM4Q9Y4Z0 AC105020.6-201ENST00000621523 1217 ntBASIC15.41■□□□□ 0.06
LSM4Q9Y4Z0 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
LSM4Q9Y4Z0 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC15.41■□□□□ 0.06
LSM4Q9Y4Z0 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LSM4Q9Y4Z0 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LSM4Q9Y4Z0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
LSM4Q9Y4Z0 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC15.41■□□□□ 0.06
LSM4Q9Y4Z0 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
LSM4Q9Y4Z0 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms