Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 DUX4L16-201ENST00000555130 1264 ntBASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 AC137761.2-201ENST00000561729 223 ntBASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 AC145350.3-201ENST00000569033 163 ntBASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 WWOX-218ENST00000627394 894 ntTSL 5 BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 TFP1-202ENST00000475455 1573 ntBASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
UBE2D4Q9Y2X8 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
UBE2D4Q9Y2X8 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC13.43□□□□□ -0.26
UBE2D4Q9Y2X8 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UBE2D4Q9Y2X8 NXN-202ENST00000537628 1340 ntTSL 3 BASIC13.43□□□□□ -0.26
UBE2D4Q9Y2X8 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UBE2D4Q9Y2X8 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC13.43□□□□□ -0.26
UBE2D4Q9Y2X8 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UBE2D4Q9Y2X8 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UBE2D4Q9Y2X8 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
UBE2D4Q9Y2X8 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
UBE2D4Q9Y2X8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC13.43□□□□□ -0.26
UBE2D4Q9Y2X8 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UBE2D4Q9Y2X8 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
UBE2D4Q9Y2X8 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC13.43□□□□□ -0.26
UBE2D4Q9Y2X8 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
UBE2D4Q9Y2X8 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC13.43□□□□□ -0.26
UBE2D4Q9Y2X8 HSCB-202ENST00000398941 955 ntTSL 2 BASIC13.43□□□□□ -0.26
UBE2D4Q9Y2X8 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
UBE2D4Q9Y2X8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC13.43□□□□□ -0.26
UBE2D4Q9Y2X8 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC13.43□□□□□ -0.26
UBE2D4Q9Y2X8 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC13.43□□□□□ -0.26
UBE2D4Q9Y2X8 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC13.43□□□□□ -0.26
UBE2D4Q9Y2X8 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
UBE2D4Q9Y2X8 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UBE2D4Q9Y2X8 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UBE2D4Q9Y2X8 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
UBE2D4Q9Y2X8 MOK-233ENST00000524214 1539 ntTSL 2 BASIC13.43□□□□□ -0.26
UBE2D4Q9Y2X8 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
UBE2D4Q9Y2X8 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
UBE2D4Q9Y2X8 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UBE2D4Q9Y2X8 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
UBE2D4Q9Y2X8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC13.43□□□□□ -0.26
UBE2D4Q9Y2X8 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC13.43□□□□□ -0.26
UBE2D4Q9Y2X8 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UBE2D4Q9Y2X8 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
UBE2D4Q9Y2X8 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC13.42□□□□□ -0.26
UBE2D4Q9Y2X8 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC13.42□□□□□ -0.26
UBE2D4Q9Y2X8 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC13.42□□□□□ -0.26
UBE2D4Q9Y2X8 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UBE2D4Q9Y2X8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC13.42□□□□□ -0.26
UBE2D4Q9Y2X8 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
UBE2D4Q9Y2X8 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UBE2D4Q9Y2X8 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UBE2D4Q9Y2X8 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
UBE2D4Q9Y2X8 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
UBE2D4Q9Y2X8 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC13.42□□□□□ -0.26
UBE2D4Q9Y2X8 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UBE2D4Q9Y2X8 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC13.42□□□□□ -0.26
UBE2D4Q9Y2X8 FP475955.4-201ENST00000623131 1990 ntBASIC13.42□□□□□ -0.26
UBE2D4Q9Y2X8 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UBE2D4Q9Y2X8 AC010980.2-201ENST00000587099 1412 ntBASIC13.42□□□□□ -0.26
UBE2D4Q9Y2X8 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC13.42□□□□□ -0.26
UBE2D4Q9Y2X8 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UBE2D4Q9Y2X8 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UBE2D4Q9Y2X8 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC13.42□□□□□ -0.26
UBE2D4Q9Y2X8 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UBE2D4Q9Y2X8 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UBE2D4Q9Y2X8 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UBE2D4Q9Y2X8 HACD1-201ENST00000326961 773 ntTSL 2 BASIC13.42□□□□□ -0.26
UBE2D4Q9Y2X8 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
UBE2D4Q9Y2X8 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
UBE2D4Q9Y2X8 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
UBE2D4Q9Y2X8 ZNRF2P3-201ENST00000424200 374 ntBASIC13.42□□□□□ -0.26
UBE2D4Q9Y2X8 AC034268.1-201ENST00000441047 882 ntBASIC13.42□□□□□ -0.26
UBE2D4Q9Y2X8 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC13.42□□□□□ -0.26
UBE2D4Q9Y2X8 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC13.42□□□□□ -0.26
UBE2D4Q9Y2X8 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
UBE2D4Q9Y2X8 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC13.42□□□□□ -0.26
UBE2D4Q9Y2X8 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms