Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
VPS9D1Q9Y2B5 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS9D1Q9Y2B5 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
VPS9D1Q9Y2B5 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.18■□□□□ 0.66
VPS9D1Q9Y2B5 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.18■□□□□ 0.66
VPS9D1Q9Y2B5 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.18■□□□□ 0.66
VPS9D1Q9Y2B5 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS9D1Q9Y2B5 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS9D1Q9Y2B5 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VPS9D1Q9Y2B5 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS9D1Q9Y2B5 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS9D1Q9Y2B5 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS9D1Q9Y2B5 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VPS9D1Q9Y2B5 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.18■□□□□ 0.66
VPS9D1Q9Y2B5 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.18■□□□□ 0.66
VPS9D1Q9Y2B5 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS9D1Q9Y2B5 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS9D1Q9Y2B5 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VPS9D1Q9Y2B5 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.18■□□□□ 0.66
VPS9D1Q9Y2B5 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.18■□□□□ 0.66
VPS9D1Q9Y2B5 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.18■□□□□ 0.66
VPS9D1Q9Y2B5 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.18■□□□□ 0.66
VPS9D1Q9Y2B5 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS9D1Q9Y2B5 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS9D1Q9Y2B5 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS9D1Q9Y2B5 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VPS9D1Q9Y2B5 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.17■□□□□ 0.66
VPS9D1Q9Y2B5 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VPS9D1Q9Y2B5 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
VPS9D1Q9Y2B5 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.17■□□□□ 0.66
VPS9D1Q9Y2B5 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS9D1Q9Y2B5 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS9D1Q9Y2B5 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS9D1Q9Y2B5 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS9D1Q9Y2B5 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.17■□□□□ 0.66
VPS9D1Q9Y2B5 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.17■□□□□ 0.66
VPS9D1Q9Y2B5 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
VPS9D1Q9Y2B5 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS9D1Q9Y2B5 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS9D1Q9Y2B5 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS9D1Q9Y2B5 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS9D1Q9Y2B5 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.17■□□□□ 0.66
VPS9D1Q9Y2B5 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.17■□□□□ 0.66
VPS9D1Q9Y2B5 CD99P1-205ENST00000527459 561 ntBASIC19.17■□□□□ 0.66
VPS9D1Q9Y2B5 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VPS9D1Q9Y2B5 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VPS9D1Q9Y2B5 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
VPS9D1Q9Y2B5 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.17■□□□□ 0.66
VPS9D1Q9Y2B5 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
VPS9D1Q9Y2B5 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS9D1Q9Y2B5 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS9D1Q9Y2B5 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS9D1Q9Y2B5 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS9D1Q9Y2B5 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS9D1Q9Y2B5 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.16■□□□□ 0.66
VPS9D1Q9Y2B5 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.16■□□□□ 0.66
VPS9D1Q9Y2B5 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
VPS9D1Q9Y2B5 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VPS9D1Q9Y2B5 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS9D1Q9Y2B5 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS9D1Q9Y2B5 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS9D1Q9Y2B5 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.16■□□□□ 0.66
VPS9D1Q9Y2B5 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
VPS9D1Q9Y2B5 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.16■□□□□ 0.66
VPS9D1Q9Y2B5 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.16■□□□□ 0.66
VPS9D1Q9Y2B5 KRT16P5-201ENST00000455284 522 ntBASIC19.16■□□□□ 0.66
VPS9D1Q9Y2B5 AC133681.1-201ENST00000465482 601 ntBASIC19.16■□□□□ 0.66
VPS9D1Q9Y2B5 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VPS9D1Q9Y2B5 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.16■□□□□ 0.66
VPS9D1Q9Y2B5 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS9D1Q9Y2B5 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VPS9D1Q9Y2B5 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VPS9D1Q9Y2B5 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.16■□□□□ 0.66
VPS9D1Q9Y2B5 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS9D1Q9Y2B5 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS9D1Q9Y2B5 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.16■□□□□ 0.66
VPS9D1Q9Y2B5 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS9D1Q9Y2B5 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VPS9D1Q9Y2B5 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS9D1Q9Y2B5 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS9D1Q9Y2B5 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS9D1Q9Y2B5 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS9D1Q9Y2B5 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS9D1Q9Y2B5 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.15■□□□□ 0.66
VPS9D1Q9Y2B5 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS9D1Q9Y2B5 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VPS9D1Q9Y2B5 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS9D1Q9Y2B5 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS9D1Q9Y2B5 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS9D1Q9Y2B5 TEX21P-204ENST00000641479 1693 ntBASIC19.15■□□□□ 0.66
VPS9D1Q9Y2B5 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.15■□□□□ 0.66
VPS9D1Q9Y2B5 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS9D1Q9Y2B5 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS9D1Q9Y2B5 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS9D1Q9Y2B5 KRASP1-201ENST00000407852 552 ntBASIC19.15■□□□□ 0.66
VPS9D1Q9Y2B5 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.15■□□□□ 0.66
VPS9D1Q9Y2B5 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
VPS9D1Q9Y2B5 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
VPS9D1Q9Y2B5 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.15■□□□□ 0.66
VPS9D1Q9Y2B5 AL023875.1-201ENST00000640777 796 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms