Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SMC3Q9UQE7 YBX1P10-201ENST00000444752 975 ntBASIC22.65■■□□□ 1.22
SMC3Q9UQE7 TSPY6P-201ENST00000448518 926 ntBASIC22.65■■□□□ 1.22
SMC3Q9UQE7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
SMC3Q9UQE7 AC097658.1-201ENST00000475555 843 ntBASIC22.65■■□□□ 1.22
SMC3Q9UQE7 MAX-217ENST00000557277 728 ntTSL 3 BASIC22.65■■□□□ 1.22
SMC3Q9UQE7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
SMC3Q9UQE7 HLA-B-256ENST00000639848 1089 ntBASIC22.65■■□□□ 1.22
SMC3Q9UQE7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
SMC3Q9UQE7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC22.65■■□□□ 1.22
SMC3Q9UQE7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC22.65■■□□□ 1.22
SMC3Q9UQE7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC22.65■■□□□ 1.22
SMC3Q9UQE7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SMC3Q9UQE7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SMC3Q9UQE7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SMC3Q9UQE7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SMC3Q9UQE7 KRT8P8-201ENST00000434750 1448 ntBASIC22.65■■□□□ 1.22
SMC3Q9UQE7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
SMC3Q9UQE7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
SMC3Q9UQE7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
SMC3Q9UQE7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
SMC3Q9UQE7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC22.64■■□□□ 1.22
SMC3Q9UQE7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
SMC3Q9UQE7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
SMC3Q9UQE7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC22.64■■□□□ 1.21
SMC3Q9UQE7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
SMC3Q9UQE7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC22.64■■□□□ 1.21
SMC3Q9UQE7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SMC3Q9UQE7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SMC3Q9UQE7 NCF1B-203ENST00000435988 1254 ntBASIC22.64■■□□□ 1.21
SMC3Q9UQE7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC22.64■■□□□ 1.21
SMC3Q9UQE7 MYC-209ENST00000641252 345 ntBASIC22.64■■□□□ 1.21
SMC3Q9UQE7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC22.64■■□□□ 1.21
SMC3Q9UQE7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC22.64■■□□□ 1.21
SMC3Q9UQE7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
SMC3Q9UQE7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
SMC3Q9UQE7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC22.63■■□□□ 1.21
SMC3Q9UQE7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC22.63■■□□□ 1.21
SMC3Q9UQE7 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SMC3Q9UQE7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC22.63■■□□□ 1.21
SMC3Q9UQE7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SMC3Q9UQE7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SMC3Q9UQE7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC22.63■■□□□ 1.21
SMC3Q9UQE7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC22.63■■□□□ 1.21
SMC3Q9UQE7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SMC3Q9UQE7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SMC3Q9UQE7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SMC3Q9UQE7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC22.63■■□□□ 1.21
SMC3Q9UQE7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SMC3Q9UQE7 MIR935-201ENST00000401179 91 ntBASIC22.63■■□□□ 1.21
SMC3Q9UQE7 NME1-207ENST00000480143 964 ntTSL 2 BASIC22.63■■□□□ 1.21
SMC3Q9UQE7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC22.63■■□□□ 1.21
SMC3Q9UQE7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC22.63■■□□□ 1.21
SMC3Q9UQE7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC22.63■■□□□ 1.21
SMC3Q9UQE7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC22.63■■□□□ 1.21
SMC3Q9UQE7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC22.62■■□□□ 1.21
SMC3Q9UQE7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMC3Q9UQE7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMC3Q9UQE7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
SMC3Q9UQE7 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SMC3Q9UQE7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMC3Q9UQE7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMC3Q9UQE7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SMC3Q9UQE7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
SMC3Q9UQE7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMC3Q9UQE7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMC3Q9UQE7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.62■■□□□ 1.21
SMC3Q9UQE7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC22.62■■□□□ 1.21
SMC3Q9UQE7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SMC3Q9UQE7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC22.62■■□□□ 1.21
SMC3Q9UQE7 SLC29A4P2-201ENST00000504749 1089 ntBASIC22.62■■□□□ 1.21
SMC3Q9UQE7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SMC3Q9UQE7 PNN-205ENST00000556530 601 ntTSL 2 BASIC22.62■■□□□ 1.21
SMC3Q9UQE7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMC3Q9UQE7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
SMC3Q9UQE7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SMC3Q9UQE7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMC3Q9UQE7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SMC3Q9UQE7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SMC3Q9UQE7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
SMC3Q9UQE7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMC3Q9UQE7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMC3Q9UQE7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
SMC3Q9UQE7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SMC3Q9UQE7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SMC3Q9UQE7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SMC3Q9UQE7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SMC3Q9UQE7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SMC3Q9UQE7 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SMC3Q9UQE7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
SMC3Q9UQE7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
SMC3Q9UQE7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
SMC3Q9UQE7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
SMC3Q9UQE7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SMC3Q9UQE7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.61■■□□□ 1.21
SMC3Q9UQE7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC22.61■■□□□ 1.21
SMC3Q9UQE7 ABHD17AP6-201ENST00000458502 1044 ntBASIC22.61■■□□□ 1.21
SMC3Q9UQE7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC22.61■■□□□ 1.21
SMC3Q9UQE7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.61■■□□□ 1.21
SMC3Q9UQE7 PNMA6B-201ENST00000538162 1200 ntBASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms