Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 ANKRD20A18P-201ENST00000359341 492 ntBASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 SAPCD2P2-201ENST00000431719 1174 ntBASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 EGLN1P1-201ENST00000531623 762 ntBASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 AC130371.2-201ENST00000619443 611 ntBASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
NOTCH3Q9UM47 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 AC117947.1-201ENST00000427448 529 ntBASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 AC116407.4-201ENST00000623319 1061 ntBASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 AP000550.4-202ENST00000639755 178 ntBASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 ME2-216ENST00000639850 2331 ntTSL 5 BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
NOTCH3Q9UM47 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NOTCH3Q9UM47 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NOTCH3Q9UM47 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NOTCH3Q9UM47 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NOTCH3Q9UM47 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NOTCH3Q9UM47 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC14.86□□□□□ -0.03
NOTCH3Q9UM47 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
NOTCH3Q9UM47 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
NOTCH3Q9UM47 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
NOTCH3Q9UM47 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NOTCH3Q9UM47 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
NOTCH3Q9UM47 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NOTCH3Q9UM47 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.86□□□□□ -0.03
NOTCH3Q9UM47 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.86□□□□□ -0.03
NOTCH3Q9UM47 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NOTCH3Q9UM47 AP000692.2-201ENST00000608391 879 ntBASIC14.86□□□□□ -0.03
NOTCH3Q9UM47 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.86□□□□□ -0.03
NOTCH3Q9UM47 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NOTCH3Q9UM47 AC006128.1-201ENST00000624704 1661 ntBASIC14.86□□□□□ -0.03
NOTCH3Q9UM47 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC14.86□□□□□ -0.03
NOTCH3Q9UM47 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NOTCH3Q9UM47 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NOTCH3Q9UM47 AC096733.2-201ENST00000609937 1394 ntBASIC14.86□□□□□ -0.03
NOTCH3Q9UM47 TFP1-202ENST00000475455 1573 ntBASIC14.86□□□□□ -0.03
NOTCH3Q9UM47 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NOTCH3Q9UM47 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms