Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
UBQLN2Q9UHD9 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
UBQLN2Q9UHD9 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.27■□□□□ 0.19
UBQLN2Q9UHD9 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.27■□□□□ 0.19
UBQLN2Q9UHD9 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
UBQLN2Q9UHD9 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.27■□□□□ 0.19
UBQLN2Q9UHD9 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 FER1L4-210ENST00000615531 5998 ntBASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 BX005040.4-201ENST00000637145 1518 ntBASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.26■□□□□ 0.19
UBQLN2Q9UHD9 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.25■□□□□ 0.19
UBQLN2Q9UHD9 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBQLN2Q9UHD9 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
UBQLN2Q9UHD9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBQLN2Q9UHD9 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBQLN2Q9UHD9 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBQLN2Q9UHD9 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBQLN2Q9UHD9 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBQLN2Q9UHD9 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.25■□□□□ 0.19
UBQLN2Q9UHD9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.25■□□□□ 0.19
UBQLN2Q9UHD9 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBQLN2Q9UHD9 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBQLN2Q9UHD9 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.25■□□□□ 0.19
UBQLN2Q9UHD9 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBQLN2Q9UHD9 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.25■□□□□ 0.19
UBQLN2Q9UHD9 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.25■□□□□ 0.19
UBQLN2Q9UHD9 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBQLN2Q9UHD9 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBQLN2Q9UHD9 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBQLN2Q9UHD9 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.25■□□□□ 0.19
UBQLN2Q9UHD9 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBQLN2Q9UHD9 PCDHA12-202ENST00000613593 2588 ntBASIC16.25■□□□□ 0.19
UBQLN2Q9UHD9 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.25■□□□□ 0.19
UBQLN2Q9UHD9 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBQLN2Q9UHD9 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 NME4-202ENST00000382940 766 ntTSL 3 BASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 NME4-211ENST00000620944 1193 ntTSL 2 BASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 MIR6084-201ENST00000622012 110 ntBASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 AC105233.4-201ENST00000642045 216 ntBASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN2Q9UHD9 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms