Protein–RNA interactions for Protein: Q9UBE8

NLK, Serine/threonine-protein kinase NLK, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLKQ9UBE8 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NLKQ9UBE8 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NLKQ9UBE8 BX119927.1-201ENST00000636596 1552 ntBASIC17.1■□□□□ 0.33
NLKQ9UBE8 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NLKQ9UBE8 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NLKQ9UBE8 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
NLKQ9UBE8 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.1■□□□□ 0.33
NLKQ9UBE8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.1■□□□□ 0.33
NLKQ9UBE8 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NLKQ9UBE8 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NLKQ9UBE8 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NLKQ9UBE8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NLKQ9UBE8 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.09■□□□□ 0.33
NLKQ9UBE8 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NLKQ9UBE8 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.09■□□□□ 0.33
NLKQ9UBE8 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NLKQ9UBE8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NLKQ9UBE8 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NLKQ9UBE8 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NLKQ9UBE8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NLKQ9UBE8 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NLKQ9UBE8 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.09■□□□□ 0.33
NLKQ9UBE8 AL512625.2-201ENST00000417533 625 ntBASIC17.09■□□□□ 0.33
NLKQ9UBE8 CROCCP5-201ENST00000436658 830 ntBASIC17.09■□□□□ 0.33
NLKQ9UBE8 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NLKQ9UBE8 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NLKQ9UBE8 AC133552.2-202ENST00000575694 574 ntBASIC17.09■□□□□ 0.33
NLKQ9UBE8 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.09■□□□□ 0.33
NLKQ9UBE8 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NLKQ9UBE8 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NLKQ9UBE8 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NLKQ9UBE8 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NLKQ9UBE8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NLKQ9UBE8 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
NLKQ9UBE8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NLKQ9UBE8 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.09■□□□□ 0.33
NLKQ9UBE8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NLKQ9UBE8 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.09■□□□□ 0.33
NLKQ9UBE8 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NLKQ9UBE8 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NLKQ9UBE8 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
NLKQ9UBE8 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
NLKQ9UBE8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NLKQ9UBE8 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NLKQ9UBE8 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NLKQ9UBE8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NLKQ9UBE8 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
NLKQ9UBE8 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NLKQ9UBE8 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.08■□□□□ 0.33
NLKQ9UBE8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.08■□□□□ 0.33
NLKQ9UBE8 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NLKQ9UBE8 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
NLKQ9UBE8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.08■□□□□ 0.32
NLKQ9UBE8 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NLKQ9UBE8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.08■□□□□ 0.32
NLKQ9UBE8 AC010980.2-201ENST00000587099 1412 ntBASIC17.08■□□□□ 0.32
NLKQ9UBE8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NLKQ9UBE8 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NLKQ9UBE8 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NLKQ9UBE8 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.08■□□□□ 0.32
NLKQ9UBE8 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NLKQ9UBE8 AC093787.1-201ENST00000450396 207 ntBASIC17.08■□□□□ 0.32
NLKQ9UBE8 AF201337.1-201ENST00000520239 748 ntBASIC17.08■□□□□ 0.32
NLKQ9UBE8 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.08■□□□□ 0.32
NLKQ9UBE8 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.08■□□□□ 0.32
NLKQ9UBE8 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.08■□□□□ 0.32
NLKQ9UBE8 AL050303.2-201ENST00000619798 666 ntBASIC17.08■□□□□ 0.32
NLKQ9UBE8 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NLKQ9UBE8 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
NLKQ9UBE8 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NLKQ9UBE8 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NLKQ9UBE8 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
NLKQ9UBE8 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NLKQ9UBE8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.08■□□□□ 0.32
NLKQ9UBE8 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
NLKQ9UBE8 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.08■□□□□ 0.32
NLKQ9UBE8 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
NLKQ9UBE8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.08■□□□□ 0.32
NLKQ9UBE8 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NLKQ9UBE8 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.07■□□□□ 0.32
NLKQ9UBE8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NLKQ9UBE8 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
NLKQ9UBE8 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NLKQ9UBE8 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NLKQ9UBE8 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NLKQ9UBE8 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NLKQ9UBE8 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
NLKQ9UBE8 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NLKQ9UBE8 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NLKQ9UBE8 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NLKQ9UBE8 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NLKQ9UBE8 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.07■□□□□ 0.32
NLKQ9UBE8 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.07■□□□□ 0.32
NLKQ9UBE8 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.07■□□□□ 0.32
NLKQ9UBE8 AC105036.2-201ENST00000569468 176 ntBASIC17.07■□□□□ 0.32
NLKQ9UBE8 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
NLKQ9UBE8 CYP2T3P-201ENST00000601990 817 ntBASIC17.07■□□□□ 0.32
NLKQ9UBE8 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
NLKQ9UBE8 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NLKQ9UBE8 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms