Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.49■■□□□ 1.03
BLOC1S4Q9NUP1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
BLOC1S4Q9NUP1 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.49■■□□□ 1.03
BLOC1S4Q9NUP1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
BLOC1S4Q9NUP1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
BLOC1S4Q9NUP1 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
BLOC1S4Q9NUP1 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
BLOC1S4Q9NUP1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
BLOC1S4Q9NUP1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.49■■□□□ 1.03
BLOC1S4Q9NUP1 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
BLOC1S4Q9NUP1 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.49■■□□□ 1.03
BLOC1S4Q9NUP1 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.49■■□□□ 1.03
BLOC1S4Q9NUP1 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
BLOC1S4Q9NUP1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
BLOC1S4Q9NUP1 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
BLOC1S4Q9NUP1 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
BLOC1S4Q9NUP1 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
BLOC1S4Q9NUP1 AL049812.1-201ENST00000432563 2267 ntBASIC21.49■■□□□ 1.03
BLOC1S4Q9NUP1 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
BLOC1S4Q9NUP1 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
BLOC1S4Q9NUP1 AC098818.2-201ENST00000564925 2320 ntBASIC21.49■■□□□ 1.03
BLOC1S4Q9NUP1 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
BLOC1S4Q9NUP1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
BLOC1S4Q9NUP1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
BLOC1S4Q9NUP1 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BLOC1S4Q9NUP1 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BLOC1S4Q9NUP1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
BLOC1S4Q9NUP1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
BLOC1S4Q9NUP1 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
BLOC1S4Q9NUP1 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BLOC1S4Q9NUP1 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.48■■□□□ 1.03
BLOC1S4Q9NUP1 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
BLOC1S4Q9NUP1 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.48■■□□□ 1.03
BLOC1S4Q9NUP1 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
BLOC1S4Q9NUP1 AP002982.1-201ENST00000492365 877 ntBASIC21.48■■□□□ 1.03
BLOC1S4Q9NUP1 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.48■■□□□ 1.03
BLOC1S4Q9NUP1 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.48■■□□□ 1.03
BLOC1S4Q9NUP1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.48■■□□□ 1.03
BLOC1S4Q9NUP1 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.48■■□□□ 1.03
BLOC1S4Q9NUP1 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BLOC1S4Q9NUP1 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BLOC1S4Q9NUP1 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.48■■□□□ 1.03
BLOC1S4Q9NUP1 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
BLOC1S4Q9NUP1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BLOC1S4Q9NUP1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.47■■□□□ 1.03
BLOC1S4Q9NUP1 AP000974.1-201ENST00000623909 2387 ntBASIC21.47■■□□□ 1.03
BLOC1S4Q9NUP1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.47■■□□□ 1.03
BLOC1S4Q9NUP1 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
BLOC1S4Q9NUP1 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.47■■□□□ 1.03
BLOC1S4Q9NUP1 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.47■■□□□ 1.03
BLOC1S4Q9NUP1 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
BLOC1S4Q9NUP1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.47■■□□□ 1.03
BLOC1S4Q9NUP1 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
BLOC1S4Q9NUP1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
BLOC1S4Q9NUP1 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.47■■□□□ 1.03
BLOC1S4Q9NUP1 KSR1P1-201ENST00000446298 240 ntBASIC21.47■■□□□ 1.03
BLOC1S4Q9NUP1 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
BLOC1S4Q9NUP1 UBE2SP1-201ENST00000450587 669 ntBASIC21.47■■□□□ 1.03
BLOC1S4Q9NUP1 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.47■■□□□ 1.03
BLOC1S4Q9NUP1 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.47■■□□□ 1.03
BLOC1S4Q9NUP1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.47■■□□□ 1.03
BLOC1S4Q9NUP1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
BLOC1S4Q9NUP1 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.47■■□□□ 1.03
BLOC1S4Q9NUP1 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
BLOC1S4Q9NUP1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
BLOC1S4Q9NUP1 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
BLOC1S4Q9NUP1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
BLOC1S4Q9NUP1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.47■■□□□ 1.03
BLOC1S4Q9NUP1 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
BLOC1S4Q9NUP1 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
BLOC1S4Q9NUP1 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
BLOC1S4Q9NUP1 AC018445.3-201ENST00000624177 1945 ntBASIC21.47■■□□□ 1.03
BLOC1S4Q9NUP1 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
BLOC1S4Q9NUP1 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.47■■□□□ 1.03
BLOC1S4Q9NUP1 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
BLOC1S4Q9NUP1 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
BLOC1S4Q9NUP1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.46■■□□□ 1.03
BLOC1S4Q9NUP1 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
BLOC1S4Q9NUP1 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
BLOC1S4Q9NUP1 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
BLOC1S4Q9NUP1 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.46■■□□□ 1.03
BLOC1S4Q9NUP1 AC087289.5-201ENST00000586076 3175 ntBASIC21.46■■□□□ 1.03
BLOC1S4Q9NUP1 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
BLOC1S4Q9NUP1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
BLOC1S4Q9NUP1 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
BLOC1S4Q9NUP1 AL353807.1-201ENST00000427475 662 ntBASIC21.46■■□□□ 1.03
BLOC1S4Q9NUP1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
BLOC1S4Q9NUP1 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.46■■□□□ 1.03
BLOC1S4Q9NUP1 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.46■■□□□ 1.03
BLOC1S4Q9NUP1 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
BLOC1S4Q9NUP1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.46■■□□□ 1.03
BLOC1S4Q9NUP1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
BLOC1S4Q9NUP1 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
BLOC1S4Q9NUP1 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
BLOC1S4Q9NUP1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
BLOC1S4Q9NUP1 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
BLOC1S4Q9NUP1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
BLOC1S4Q9NUP1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
BLOC1S4Q9NUP1 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.46■■□□□ 1.03
BLOC1S4Q9NUP1 BX323043.1-201ENST00000641006 1765 ntBASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms