Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DDX47Q9H0S4 AC231657.2-201ENST00000624556 255 ntBASIC20.12■□□□□ 0.81
DDX47Q9H0S4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.12■□□□□ 0.81
DDX47Q9H0S4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX47Q9H0S4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX47Q9H0S4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
DDX47Q9H0S4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX47Q9H0S4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX47Q9H0S4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.12■□□□□ 0.81
DDX47Q9H0S4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX47Q9H0S4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
DDX47Q9H0S4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DDX47Q9H0S4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
DDX47Q9H0S4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.11■□□□□ 0.81
DDX47Q9H0S4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
DDX47Q9H0S4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.11■□□□□ 0.81
DDX47Q9H0S4 AC135050.7-201ENST00000624508 2218 ntBASIC20.11■□□□□ 0.81
DDX47Q9H0S4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
DDX47Q9H0S4 AL390961.4-201ENST00000623958 2535 ntBASIC20.11■□□□□ 0.81
DDX47Q9H0S4 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
DDX47Q9H0S4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX47Q9H0S4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX47Q9H0S4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
DDX47Q9H0S4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.11■□□□□ 0.81
DDX47Q9H0S4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX47Q9H0S4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
DDX47Q9H0S4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.11■□□□□ 0.81
DDX47Q9H0S4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX47Q9H0S4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.11■□□□□ 0.81
DDX47Q9H0S4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
DDX47Q9H0S4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
DDX47Q9H0S4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX47Q9H0S4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
DDX47Q9H0S4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.11■□□□□ 0.81
DDX47Q9H0S4 AC090164.3-201ENST00000610780 2143 ntBASIC20.11■□□□□ 0.81
DDX47Q9H0S4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX47Q9H0S4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.1■□□□□ 0.81
DDX47Q9H0S4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
DDX47Q9H0S4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
DDX47Q9H0S4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
DDX47Q9H0S4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
DDX47Q9H0S4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.1■□□□□ 0.81
DDX47Q9H0S4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX47Q9H0S4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX47Q9H0S4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX47Q9H0S4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
DDX47Q9H0S4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX47Q9H0S4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX47Q9H0S4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX47Q9H0S4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
DDX47Q9H0S4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.1■□□□□ 0.81
DDX47Q9H0S4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.1■□□□□ 0.81
DDX47Q9H0S4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
DDX47Q9H0S4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.1■□□□□ 0.81
DDX47Q9H0S4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.1■□□□□ 0.81
DDX47Q9H0S4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX47Q9H0S4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX47Q9H0S4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
DDX47Q9H0S4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX47Q9H0S4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX47Q9H0S4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX47Q9H0S4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.09■□□□□ 0.81
DDX47Q9H0S4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
DDX47Q9H0S4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX47Q9H0S4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.09■□□□□ 0.81
DDX47Q9H0S4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX47Q9H0S4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.09■□□□□ 0.81
DDX47Q9H0S4 AL512625.2-201ENST00000417533 625 ntBASIC20.09■□□□□ 0.81
DDX47Q9H0S4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
DDX47Q9H0S4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
DDX47Q9H0S4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.09■□□□□ 0.81
DDX47Q9H0S4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX47Q9H0S4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.09■□□□□ 0.81
DDX47Q9H0S4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX47Q9H0S4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX47Q9H0S4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX47Q9H0S4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX47Q9H0S4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
DDX47Q9H0S4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
DDX47Q9H0S4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
DDX47Q9H0S4 AC093525.10-201ENST00000625130 1569 ntBASIC20.08■□□□□ 0.81
DDX47Q9H0S4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
DDX47Q9H0S4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
DDX47Q9H0S4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.08■□□□□ 0.81
DDX47Q9H0S4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.08■□□□□ 0.81
DDX47Q9H0S4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.08■□□□□ 0.81
DDX47Q9H0S4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
DDX47Q9H0S4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.08■□□□□ 0.81
DDX47Q9H0S4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
DDX47Q9H0S4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
DDX47Q9H0S4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
DDX47Q9H0S4 AC104417.2-201ENST00000562989 1793 ntBASIC20.08■□□□□ 0.8
DDX47Q9H0S4 Z98044.1-201ENST00000632503 1764 ntBASIC20.08■□□□□ 0.8
DDX47Q9H0S4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
DDX47Q9H0S4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.08■□□□□ 0.8
DDX47Q9H0S4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.08■□□□□ 0.8
DDX47Q9H0S4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
DDX47Q9H0S4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
DDX47Q9H0S4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DDX47Q9H0S4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms