Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AL008626.1-201ENST00000412357 775 ntTSL 2 BASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 NONOP2-201ENST00000414613 1231 ntBASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 ECHDC1-207ENST00000430841 1009 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 AL158168.1-201ENST00000443282 357 ntTSL 3 BASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 BX322234.2-201ENST00000457833 654 ntTSL 3 BASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 AF107885.1-201ENST00000498401 958 ntBASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 RNU6-875P-201ENST00000516488 106 ntBASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 RNU6-528P-201ENST00000516926 100 ntBASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 OR5BC1P-201ENST00000529327 739 ntBASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 ASB8-203ENST00000535988 679 ntTSL 2 BASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 AC006362.1-201ENST00000567392 174 ntBASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 RN7SL134P-201ENST00000579756 303 ntBASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 PART1_1.1-201ENST00000611761 217 ntBASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 AC008083.4-201ENST00000615076 444 ntBASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 AC008691.1-209ENST00000642094 814 ntBASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 PREB-202ENST00000406567 1910 ntTSL 5 BASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 AC138932.3-201ENST00000567634 1902 ntBASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 MYLK-220ENST00000578202 1447 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 AC004520.1-201ENST00000608362 1413 ntBASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
KRTAP3-3Q9BYR6 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 Y_RNA.194-201ENST00000363985 102 ntBASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 ZNF603P-201ENST00000405613 487 ntBASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 GLS-203ENST00000409215 632 ntTSL 4 BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 OR7E155P-201ENST00000412208 1014 ntBASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 BX119904.3-201ENST00000428194 957 ntBASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 TRIM60P8Y-201ENST00000436338 762 ntBASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 USP9YP22-201ENST00000438971 294 ntBASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 TULP3P1-201ENST00000442322 816 ntTSL 3 BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 AL354707.1-204ENST00000451142 846 ntTSL 2 BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 AC108751.3-201ENST00000461814 1020 ntBASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 RN7SKP64-201ENST00000517206 328 ntBASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 AC091946.1-201ENST00000522350 852 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 PUDP-206ENST00000540122 825 ntTSL 2 BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 AC012640.2-201ENST00000561606 901 ntBASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 TIMM23-201ENST00000580018 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 AC021231.2-201ENST00000594613 730 ntBASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 IGFL4-204ENST00000601672 667 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 AL031768.1-201ENST00000606542 701 ntBASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 Metazoa_SRP.133-201ENST00000612964 317 ntBASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 OR7G15P-201ENST00000617262 333 ntBASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 AC117503.3-201ENST00000623811 601 ntBASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC11.92□□□□□ -0.5
KRTAP3-3Q9BYR6 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 AL139125.2-201ENST00000623134 1869 ntBASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms