RNA–Protein interactions for RNA: ENST00000546380.1

NR1H4-204, Transcript of nuclear receptor subfamily 1 group H member 4, humanhuman

TSL 3 BASIC

Gene NR1H4, Length 565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4-204ENST00000546380 AEBP2Q6ZN18 517 aaPredicted RBP26.85■■□□□ 1.89
NR1H4-204ENST00000546380 CHIC1Q5VXU3 224 aa25.37■■□□□ 1.65
NR1H4-204ENST00000546380 SENP3Q9H4L4 574 aaPredicted RBP22.96■■□□□ 1.27
NR1H4-204ENST00000546380 PHF23Q9BUL5 403 aaPredicted RBP22.6■■□□□ 1.21
NR1H4-204ENST00000546380 FOXD1Q16676 465 aa21.38■■□□□ 1.01
NR1H4-204ENST00000546380 PLPPR3Q6T4P5 718 aa20.22■□□□□ 0.83
NR1H4-204ENST00000546380 MSH5O43196 834 aa20.1■□□□□ 0.81
NR1H4-204ENST00000546380 PIAS4Q8N2W9 510 aaPredicted RBP19.98■□□□□ 0.79
NR1H4-204ENST00000546380 PPP6R1Q9UPN7 881 aa19.86■□□□□ 0.77
NR1H4-204ENST00000546380 POTEDQ86YR6 584 aa19.85■□□□□ 0.77
NR1H4-204ENST00000546380 ADRA2BP18089 450 aa19.8■□□□□ 0.76
NR1H4-204ENST00000546380 MAPK8IP2Q13387 824 aaPredicted RBP18.21■□□□□ 0.51
NR1H4-204ENST00000546380 DMRT2Q9Y5R5 561 aa18.17■□□□□ 0.5
NR1H4-204ENST00000546380 SCAF1Q9H7N4 1312 aaKnown RBP18.14■□□□□ 0.49
NR1H4-204ENST00000546380 PPP4R3CPQ6ZMV5 832 aa17.68■□□□□ 0.42
NR1H4-204ENST00000546380 DCAF8L1A6NGE4 600 aa17.45■□□□□ 0.38
NR1H4-204ENST00000546380 HOXD11P31277 338 aaPredicted RBP17.44■□□□□ 0.38
NR1H4-204ENST00000546380 CNKSR2Q8WXI2 1034 aa17.4■□□□□ 0.38
NR1H4-204ENST00000546380 CACNB1Q02641 598 aaPredicted RBP17.33■□□□□ 0.36
NR1H4-204ENST00000546380 RNF216Q9NWF9 866 aaPredicted RBP17.28■□□□□ 0.36
NR1H4-204ENST00000546380 RNF39Q9H2S5 420 aa17.13■□□□□ 0.33
NR1H4-204ENST00000546380 NCBP3Q53F19 620 aaKnown RBP16.98■□□□□ 0.31
NR1H4-204ENST00000546380 C1QBPQ07021 282 aaKnown RBP16.87■□□□□ 0.29
NR1H4-204ENST00000546380 DNAJC5BQ9UF47 199 aa16.87■□□□□ 0.29
NR1H4-204ENST00000546380 NPM3O75607 178 aaKnown RBP16.72■□□□□ 0.27
NR1H4-204ENST00000546380 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.62■□□□□ 0.258e-7■■■□□ 15.4
NR1H4-204ENST00000546380 KCNA4P22459 653 aa16.27■□□□□ 0.2
NR1H4-204ENST00000546380 U3KPZ7 1027 aaPredicted RBP16.26■□□□□ 0.19
NR1H4-204ENST00000546380 CAPN15O75808 1086 aa16.06■□□□□ 0.16
NR1H4-204ENST00000546380 SPINK5Q9NQ38 1064 aaPredicted RBP16.06■□□□□ 0.16
NR1H4-204ENST00000546380 SLC4A2P04920 1241 aa15.99■□□□□ 0.15
NR1H4-204ENST00000546380 DSG3P32926 999 aa15.98■□□□□ 0.15
NR1H4-204ENST00000546380 APLP2Q06481 763 aa15.82■□□□□ 0.12
NR1H4-204ENST00000546380 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.76■□□□□ 0.11
NR1H4-204ENST00000546380 HNRNPUL2Q1KMD3 747 aaKnown RBP15.76■□□□□ 0.11
NR1H4-204ENST00000546380 TRHP20396 242 aaPredicted RBP15.75■□□□□ 0.11
NR1H4-204ENST00000546380 ZNF219Q9P2Y4 722 aaPredicted RBP15.75■□□□□ 0.11
NR1H4-204ENST00000546380 ABCB7O75027 752 aa15.67■□□□□ 0.1
NR1H4-204ENST00000546380 SAMD1Q6SPF0 538 aaPredicted RBP15.66■□□□□ 0.1
NR1H4-204ENST00000546380 POTEHQ6S545 545 aa15.54■□□□□ 0.08
NR1H4-204ENST00000546380 MYCNP04198 464 aaPredicted RBP15.5■□□□□ 0.07
NR1H4-204ENST00000546380 SLC4A1APQ9BWU0 796 aaKnown RBP15.34■□□□□ 0.05
NR1H4-204ENST00000546380 RBM42Q9BTD8 480 aaKnown RBP15.29■□□□□ 0.04
NR1H4-204ENST00000546380 POLA2Q14181 598 aa15.27■□□□□ 0.04
NR1H4-204ENST00000546380 FOXD4L1Q9NU39 408 aa15.25■□□□□ 0.03
NR1H4-204ENST00000546380 ATF5Q9Y2D1 282 aaPredicted RBP15.11■□□□□ 0.01
NR1H4-204ENST00000546380 ZBTB12Q9Y330 459 aaPredicted RBP15.01□□□□□ -0.01
NR1H4-204ENST00000546380 CHRDL2Q6WN34 429 aa14.99□□□□□ -0.01
NR1H4-204ENST00000546380 ZBTB22O15209 634 aa14.95□□□□□ -0.02
NR1H4-204ENST00000546380 AKT1S1Q96B36 256 aa14.89□□□□□ -0.03
NR1H4-204ENST00000546380 OSCARQ8IYS5 282 aa14.85□□□□□ -0.03
NR1H4-204ENST00000546380 ATXN8OSP0DMR3 200 aa14.78□□□□□ -0.04
NR1H4-204ENST00000546380 REM2Q8IYK8 340 aaPredicted RBP14.73□□□□□ -0.05
NR1H4-204ENST00000546380 PITPNM1O00562 1244 aa14.6□□□□□ -0.07
NR1H4-204ENST00000546380 PIP4P2Q8N4L2 257 aa14.6□□□□□ -0.07
NR1H4-204ENST00000546380 FBLN2P98095 1184 aa14.57□□□□□ -0.08
NR1H4-204ENST00000546380 SPDYE2BA6NHP3 402 aa14.52□□□□□ -0.09
NR1H4-204ENST00000546380 SPDYE6P0CI01 402 aa14.52□□□□□ -0.09
NR1H4-204ENST00000546380 SPDYE2Q495Y8 402 aa14.52□□□□□ -0.09
NR1H4-204ENST00000546380 SP7Q8TDD2 431 aaPredicted RBP14.5□□□□□ -0.09
NR1H4-204ENST00000546380 FXR2P51116 673 aaKnown RBP eCLIP14.48□□□□□ -0.09
NR1H4-204ENST00000546380 MKRN4PQ13434 485 aaPredicted RBP14.41□□□□□ -0.1
NR1H4-204ENST00000546380 HAX1O00165 279 aa14.36□□□□□ -0.11
NR1H4-204ENST00000546380 SSUH2Q9Y2M2 353 aa14.31□□□□□ -0.12
NR1H4-204ENST00000546380 SPDYE1Q8NFV5 336 aaPredicted RBP14.3□□□□□ -0.12
NR1H4-204ENST00000546380 ZNF692Q9BU19 519 aaPredicted RBP14.3□□□□□ -0.12
NR1H4-204ENST00000546380 CLEC11AQ9Y240 323 aa14.28□□□□□ -0.12
NR1H4-204ENST00000546380 PRKAR2AP13861 404 aaKnown RBP14.21□□□□□ -0.13
NR1H4-204ENST00000546380 EVX2Q03828 476 aa14.14□□□□□ -0.15
NR1H4-204ENST00000546380 CSRNP3Q8WYN3 585 aa14.11□□□□□ -0.15
NR1H4-204ENST00000546380 PABPN1Q86U42 306 aaKnown RBP eCLIP14.09□□□□□ -0.15
NR1H4-204ENST00000546380 C19orf67A6NJJ6 358 aa14.03□□□□□ -0.16
NR1H4-204ENST00000546380 CHADLQ6NUI6 762 aa14.02□□□□□ -0.17
NR1H4-204ENST00000546380 PRR29P0C7W0 189 aa14.01□□□□□ -0.17
NR1H4-204ENST00000546380 EHMT2Q96KQ7 1210 aa13.89□□□□□ -0.19
NR1H4-204ENST00000546380 GABBR2O75899 941 aa13.85□□□□□ -0.19
NR1H4-204ENST00000546380 FARP1Q9Y4F1 1045 aaPredicted RBP13.79□□□□□ -0.2
NR1H4-204ENST00000546380 CD44P16070 742 aaKnown RBP13.76□□□□□ -0.21
NR1H4-204ENST00000546380 STAG3Q9UJ98 1225 aa13.68□□□□□ -0.22
NR1H4-204ENST00000546380 SPDYE4A6NLX3 237 aa13.67□□□□□ -0.22
NR1H4-204ENST00000546380 CREBZFQ9NS37 354 aa13.63□□□□□ -0.23
NR1H4-204ENST00000546380 CLCN6P51797 869 aa13.59□□□□□ -0.23
NR1H4-204ENST00000546380 LHX8Q68G74 356 aa13.58□□□□□ -0.24
NR1H4-204ENST00000546380 ZNF579Q8NAF0 562 aaKnown RBP13.55□□□□□ -0.24
NR1H4-204ENST00000546380 POTEIP0CG38 1075 aa13.54□□□□□ -0.24
NR1H4-204ENST00000546380 ZRANB1Q9UGI0 708 aa13.54□□□□□ -0.24
NR1H4-204ENST00000546380 DCBLD2Q96PD2 775 aa13.46□□□□□ -0.25
NR1H4-204ENST00000546380 PAK3O75914 559 aaPredicted RBP13.42□□□□□ -0.26
NR1H4-204ENST00000546380 NPM1P06748 294 aaKnown RBP eCLIP13.39□□□□□ -0.27
NR1H4-204ENST00000546380 GALR2O43603 387 aaPredicted RBP13.38□□□□□ -0.27
NR1H4-204ENST00000546380 MNX1P50219 401 aaPredicted RBP13.37□□□□□ -0.27
NR1H4-204ENST00000546380 PHF12Q96QT6 1004 aa13.34□□□□□ -0.27
NR1H4-204ENST00000546380 PROM2Q8N271 834 aa13.32□□□□□ -0.28
NR1H4-204ENST00000546380 MS4A3Q96HJ5 214 aa13.17□□□□□ -0.3
NR1H4-204ENST00000546380 TSPYL2Q9H2G4 693 aaPredicted RBP13.13□□□□□ -0.31
NR1H4-204ENST00000546380 PELP1Q8IZL8 1130 aaKnown RBP13.11□□□□□ -0.31
NR1H4-204ENST00000546380 POTEB2H3BUK9 544 aa13.09□□□□□ -0.31
NR1H4-204ENST00000546380 PLEKHG5O94827 1062 aa13.09□□□□□ -0.31
NR1H4-204ENST00000546380 ASTLQ6HA08 431 aaPredicted RBP13.09□□□□□ -0.31
NR1H4-204ENST00000546380 OTUD5Q96G74 571 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms