RNA–Protein interactions for RNA: ENST00000512547.1

LINC02500-201, Transcript of long intergenic non-protein coding RNA 2500, humanhuman

TSL 3 BASIC

Gene LINC02500, Length 493 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02500-201ENST00000512547 AEBP2Q6ZN18 517 aaPredicted RBP27.01■■□□□ 1.91
LINC02500-201ENST00000512547 CHIC1Q5VXU3 224 aa26.02■■□□□ 1.76
LINC02500-201ENST00000512547 SENP3Q9H4L4 574 aaPredicted RBP23.07■■□□□ 1.28
LINC02500-201ENST00000512547 PHF23Q9BUL5 403 aaPredicted RBP22.76■■□□□ 1.23
LINC02500-201ENST00000512547 FOXD1Q16676 465 aa21.4■■□□□ 1.02
LINC02500-201ENST00000512547 PLPPR3Q6T4P5 718 aa21.02■□□□□ 0.96
LINC02500-201ENST00000512547 PPP6R1Q9UPN7 881 aa20.2■□□□□ 0.82
LINC02500-201ENST00000512547 ADRA2BP18089 450 aa20.18■□□□□ 0.82
LINC02500-201ENST00000512547 PIAS4Q8N2W9 510 aaPredicted RBP20.09■□□□□ 0.81
LINC02500-201ENST00000512547 MSH5O43196 834 aa19.96■□□□□ 0.79
LINC02500-201ENST00000512547 POTEDQ86YR6 584 aa19.37■□□□□ 0.69
LINC02500-201ENST00000512547 SCAF1Q9H7N4 1312 aaKnown RBP18.64■□□□□ 0.57
LINC02500-201ENST00000512547 MAPK8IP2Q13387 824 aaPredicted RBP18.43■□□□□ 0.54
LINC02500-201ENST00000512547 PPP4R3CPQ6ZMV5 832 aa18.42■□□□□ 0.54
LINC02500-201ENST00000512547 DMRT2Q9Y5R5 561 aa18.31■□□□□ 0.52
LINC02500-201ENST00000512547 CNKSR2Q8WXI2 1034 aa18.03■□□□□ 0.48
LINC02500-201ENST00000512547 NCBP3Q53F19 620 aaKnown RBP17.93■□□□□ 0.46
LINC02500-201ENST00000512547 HOXD11P31277 338 aaPredicted RBP17.78■□□□□ 0.44
LINC02500-201ENST00000512547 RNF216Q9NWF9 866 aaPredicted RBP17.78■□□□□ 0.44
LINC02500-201ENST00000512547 DCAF8L1A6NGE4 600 aa17.54■□□□□ 0.4
LINC02500-201ENST00000512547 NPM3O75607 178 aaKnown RBP17.54■□□□□ 0.4
LINC02500-201ENST00000512547 KCNA4P22459 653 aa17.51■□□□□ 0.39
LINC02500-201ENST00000512547 DNAJC5BQ9UF47 199 aa17.19■□□□□ 0.34
LINC02500-201ENST00000512547 CACNB1Q02641 598 aaPredicted RBP17.05■□□□□ 0.32
LINC02500-201ENST00000512547 RNF39Q9H2S5 420 aa17.04■□□□□ 0.32
LINC02500-201ENST00000512547 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.97■□□□□ 0.31
LINC02500-201ENST00000512547 C1QBPQ07021 282 aaKnown RBP16.84■□□□□ 0.29
LINC02500-201ENST00000512547 SLC4A1APQ9BWU0 796 aaKnown RBP16.66■□□□□ 0.26
LINC02500-201ENST00000512547 SLC4A2P04920 1241 aa16.62■□□□□ 0.25
LINC02500-201ENST00000512547 U3KPZ7 1027 aaPredicted RBP16.58■□□□□ 0.24
LINC02500-201ENST00000512547 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.41■□□□□ 0.22
LINC02500-201ENST00000512547 HNRNPUL2Q1KMD3 747 aaKnown RBP16.41■□□□□ 0.22
LINC02500-201ENST00000512547 APLP2Q06481 763 aa16.35■□□□□ 0.21
LINC02500-201ENST00000512547 MYCNP04198 464 aaPredicted RBP16.29■□□□□ 0.2
LINC02500-201ENST00000512547 SAMD1Q6SPF0 538 aaPredicted RBP16.29■□□□□ 0.2
LINC02500-201ENST00000512547 FOXD4L1Q9NU39 408 aa16.29■□□□□ 0.2
LINC02500-201ENST00000512547 CAPN15O75808 1086 aa16.24■□□□□ 0.19
LINC02500-201ENST00000512547 SPINK5Q9NQ38 1064 aaPredicted RBP16.21■□□□□ 0.19
LINC02500-201ENST00000512547 ZNF219Q9P2Y4 722 aaPredicted RBP16.11■□□□□ 0.17
LINC02500-201ENST00000512547 ZBTB22O15209 634 aa16.05■□□□□ 0.16
LINC02500-201ENST00000512547 TRHP20396 242 aaPredicted RBP16.05■□□□□ 0.16
LINC02500-201ENST00000512547 DSG3P32926 999 aa16.03■□□□□ 0.16
LINC02500-201ENST00000512547 ABCB7O75027 752 aa15.84■□□□□ 0.13
LINC02500-201ENST00000512547 ATXN8OSP0DMR3 200 aa15.82■□□□□ 0.12
LINC02500-201ENST00000512547 ATF5Q9Y2D1 282 aaPredicted RBP15.75■□□□□ 0.11
LINC02500-201ENST00000512547 POLA2Q14181 598 aa15.71■□□□□ 0.11
LINC02500-201ENST00000512547 CSRNP3Q8WYN3 585 aa15.69■□□□□ 0.1
LINC02500-201ENST00000512547 EHMT2Q96KQ7 1210 aa15.69■□□□□ 0.1
LINC02500-201ENST00000512547 ZBTB12Q9Y330 459 aaPredicted RBP15.54■□□□□ 0.08
LINC02500-201ENST00000512547 RBM42Q9BTD8 480 aaKnown RBP15.4■□□□□ 0.06
LINC02500-201ENST00000512547 FBLN2P98095 1184 aa15.29■□□□□ 0.04
LINC02500-201ENST00000512547 OSCARQ8IYS5 282 aa15.17■□□□□ 0.02
LINC02500-201ENST00000512547 POTEHQ6S545 545 aa15.16■□□□□ 0.02
LINC02500-201ENST00000512547 AKT1S1Q96B36 256 aa15.08■□□□□ 0
LINC02500-201ENST00000512547 MKRN4PQ13434 485 aaPredicted RBP15.06■□□□□ 0
LINC02500-201ENST00000512547 SPDYE2BA6NHP3 402 aa15.03■□□□□ -0
LINC02500-201ENST00000512547 SPDYE6P0CI01 402 aa15.03■□□□□ -0
LINC02500-201ENST00000512547 SPDYE2Q495Y8 402 aa15.03■□□□□ -0
LINC02500-201ENST00000512547 REM2Q8IYK8 340 aaPredicted RBP14.89□□□□□ -0.03
LINC02500-201ENST00000512547 ZNF692Q9BU19 519 aaPredicted RBP14.89□□□□□ -0.03
LINC02500-201ENST00000512547 CHRDL2Q6WN34 429 aa14.87□□□□□ -0.03
LINC02500-201ENST00000512547 SSUH2Q9Y2M2 353 aa14.82□□□□□ -0.04
LINC02500-201ENST00000512547 PITPNM1O00562 1244 aa14.7□□□□□ -0.06
LINC02500-201ENST00000512547 SPDYE1Q8NFV5 336 aaPredicted RBP14.69□□□□□ -0.06
LINC02500-201ENST00000512547 PABPN1Q86U42 306 aaKnown RBP eCLIP14.66□□□□□ -0.06
LINC02500-201ENST00000512547 SPDYE4A6NLX3 237 aa14.62□□□□□ -0.07
LINC02500-201ENST00000512547 CLEC11AQ9Y240 323 aa14.59□□□□□ -0.07
LINC02500-201ENST00000512547 PIP4P2Q8N4L2 257 aa14.56□□□□□ -0.08
LINC02500-201ENST00000512547 FXR2P51116 673 aaKnown RBP eCLIP14.53□□□□□ -0.08
LINC02500-201ENST00000512547 PRR29P0C7W0 189 aa14.44□□□□□ -0.1
LINC02500-201ENST00000512547 STAG3Q9UJ98 1225 aa14.43□□□□□ -0.1
LINC02500-201ENST00000512547 PRKAR2AP13861 404 aaKnown RBP14.35□□□□□ -0.11
LINC02500-201ENST00000512547 PROM2Q8N271 834 aa14.31□□□□□ -0.12
LINC02500-201ENST00000512547 HAX1O00165 279 aa14.24□□□□□ -0.13
LINC02500-201ENST00000512547 FKBP8Q14318 412 aa14.24□□□□□ -0.13
LINC02500-201ENST00000512547 SP7Q8TDD2 431 aaPredicted RBP14.24□□□□□ -0.13
LINC02500-201ENST00000512547 EVX2Q03828 476 aa14.2□□□□□ -0.14
LINC02500-201ENST00000512547 CHADLQ6NUI6 762 aa14.2□□□□□ -0.14
LINC02500-201ENST00000512547 FARP1Q9Y4F1 1045 aaPredicted RBP14.11□□□□□ -0.15
LINC02500-201ENST00000512547 CREBZFQ9NS37 354 aa14.1□□□□□ -0.15
LINC02500-201ENST00000512547 C19orf67A6NJJ6 358 aa14.04□□□□□ -0.16
LINC02500-201ENST00000512547 PLEKHG5O94827 1062 aa13.99□□□□□ -0.17
LINC02500-201ENST00000512547 NPM1P06748 294 aaKnown RBP eCLIP13.97□□□□□ -0.17
LINC02500-201ENST00000512547 FBXO3Q9UK99 471 aa13.95□□□□□ -0.18
LINC02500-201ENST00000512547 MIER1Q8N108 512 aa13.93□□□□□ -0.18
LINC02500-201ENST00000512547 CD44P16070 742 aaKnown RBP13.92□□□□□ -0.18
LINC02500-201ENST00000512547 MNX1P50219 401 aaPredicted RBP13.89□□□□□ -0.19
LINC02500-201ENST00000512547 PLCD3Q8N3E9 789 aa13.87□□□□□ -0.19
LINC02500-201ENST00000512547 PAK3O75914 559 aaPredicted RBP13.85□□□□□ -0.19
LINC02500-201ENST00000512547 ZBTB47Q9UFB7 747 aaPredicted RBP13.82□□□□□ -0.2
LINC02500-201ENST00000512547 CLCN6P51797 869 aa13.81□□□□□ -0.2
LINC02500-201ENST00000512547 GABBR2O75899 941 aa13.79□□□□□ -0.2
LINC02500-201ENST00000512547 ZRANB1Q9UGI0 708 aa13.79□□□□□ -0.2
LINC02500-201ENST00000512547 ZNF579Q8NAF0 562 aaKnown RBP13.74□□□□□ -0.21
LINC02500-201ENST00000512547 VASPP50552 380 aaPredicted RBP13.68□□□□□ -0.22
LINC02500-201ENST00000512547 TSPYL2Q9H2G4 693 aaPredicted RBP13.63□□□□□ -0.23
LINC02500-201ENST00000512547 RASEFQ8IZ41 740 aa13.58□□□□□ -0.24
LINC02500-201ENST00000512547 POTEIP0CG38 1075 aa13.57□□□□□ -0.24
LINC02500-201ENST00000512547 KLHL34Q8N239 644 aa13.57□□□□□ -0.24
LINC02500-201ENST00000512547 PHF12Q96QT6 1004 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms