Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 AC126755.1-201ENST00000525846 6405 ntBASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC5.21□□□□□ -1.58
LCE3DQ9BYE3 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 SERBP1P1-201ENST00000396021 1160 ntBASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 KRT16P3-201ENST00000439127 1283 ntBASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 SF1-220ENST00000626028 704 ntTSL 2 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 KRT16P2-201ENST00000414673 1423 ntBASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms