Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC15.92■□□□□ 0.14
S1PR3Q99500 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
S1PR3Q99500 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
S1PR3Q99500 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
S1PR3Q99500 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
S1PR3Q99500 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
S1PR3Q99500 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
S1PR3Q99500 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
S1PR3Q99500 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
S1PR3Q99500 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
S1PR3Q99500 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
S1PR3Q99500 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
S1PR3Q99500 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.92■□□□□ 0.14
S1PR3Q99500 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
S1PR3Q99500 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15.92■□□□□ 0.14
S1PR3Q99500 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC15.92■□□□□ 0.14
S1PR3Q99500 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC15.92■□□□□ 0.14
S1PR3Q99500 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
S1PR3Q99500 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC15.92■□□□□ 0.14
S1PR3Q99500 PTGES2-AS1-201ENST00000443493 2100 ntBASIC15.92■□□□□ 0.14
S1PR3Q99500 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
S1PR3Q99500 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
S1PR3Q99500 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
S1PR3Q99500 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC15.92■□□□□ 0.14
S1PR3Q99500 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
S1PR3Q99500 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
S1PR3Q99500 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
S1PR3Q99500 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
S1PR3Q99500 AC124283.5-201ENST00000624661 1809 ntBASIC15.91■□□□□ 0.14
S1PR3Q99500 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC15.91■□□□□ 0.14
S1PR3Q99500 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
S1PR3Q99500 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
S1PR3Q99500 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
S1PR3Q99500 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
S1PR3Q99500 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
S1PR3Q99500 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
S1PR3Q99500 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
S1PR3Q99500 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
S1PR3Q99500 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
S1PR3Q99500 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
S1PR3Q99500 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
S1PR3Q99500 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
S1PR3Q99500 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC15.91■□□□□ 0.14
S1PR3Q99500 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC15.91■□□□□ 0.14
S1PR3Q99500 SLC29A4P2-201ENST00000504749 1089 ntBASIC15.91■□□□□ 0.14
S1PR3Q99500 DENND3-207ENST00000518347 850 ntTSL 2 BASIC15.91■□□□□ 0.14
S1PR3Q99500 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC15.91■□□□□ 0.14
S1PR3Q99500 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC15.91■□□□□ 0.14
S1PR3Q99500 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC15.91■□□□□ 0.14
S1PR3Q99500 AC120498.8-201ENST00000614275 531 ntBASIC15.91■□□□□ 0.14
S1PR3Q99500 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
S1PR3Q99500 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
S1PR3Q99500 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
S1PR3Q99500 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
S1PR3Q99500 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
S1PR3Q99500 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
S1PR3Q99500 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC15.91■□□□□ 0.14
S1PR3Q99500 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
S1PR3Q99500 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
S1PR3Q99500 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
S1PR3Q99500 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
S1PR3Q99500 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
S1PR3Q99500 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
S1PR3Q99500 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.91■□□□□ 0.14
S1PR3Q99500 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
S1PR3Q99500 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
S1PR3Q99500 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
S1PR3Q99500 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC15.9■□□□□ 0.14
S1PR3Q99500 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
S1PR3Q99500 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
S1PR3Q99500 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
S1PR3Q99500 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
S1PR3Q99500 YBX1P10-201ENST00000444752 975 ntBASIC15.9■□□□□ 0.14
S1PR3Q99500 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
S1PR3Q99500 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC15.9■□□□□ 0.14
S1PR3Q99500 CD99P1-205ENST00000527459 561 ntBASIC15.9■□□□□ 0.14
S1PR3Q99500 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC15.9■□□□□ 0.14
S1PR3Q99500 UNC93B5-201ENST00000530315 699 ntBASIC15.9■□□□□ 0.14
S1PR3Q99500 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
S1PR3Q99500 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC15.9■□□□□ 0.14
S1PR3Q99500 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC15.9■□□□□ 0.14
S1PR3Q99500 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
S1PR3Q99500 SOX15-203ENST00000570788 1093 ntBASIC15.9■□□□□ 0.14
S1PR3Q99500 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC15.9■□□□□ 0.14
S1PR3Q99500 TBCB-214ENST00000629269 413 ntTSL 5 BASIC15.9■□□□□ 0.14
S1PR3Q99500 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
S1PR3Q99500 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC15.9■□□□□ 0.14
S1PR3Q99500 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
S1PR3Q99500 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
S1PR3Q99500 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
S1PR3Q99500 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.9■□□□□ 0.14
S1PR3Q99500 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
S1PR3Q99500 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC15.89■□□□□ 0.13
S1PR3Q99500 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
S1PR3Q99500 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
S1PR3Q99500 TNXA-203ENST00000507684 2038 ntBASIC15.89■□□□□ 0.13
S1PR3Q99500 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
S1PR3Q99500 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
S1PR3Q99500 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
S1PR3Q99500 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms