Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
NEK1Q96PY6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC22.86■■□□□ 1.25
NEK1Q96PY6 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
NEK1Q96PY6 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
NEK1Q96PY6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
NEK1Q96PY6 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
NEK1Q96PY6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC22.86■■□□□ 1.25
NEK1Q96PY6 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC22.86■■□□□ 1.25
NEK1Q96PY6 RPPH1-201ENST00000516869 333 ntBASIC22.86■■□□□ 1.25
NEK1Q96PY6 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC22.86■■□□□ 1.25
NEK1Q96PY6 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC22.86■■□□□ 1.25
NEK1Q96PY6 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
NEK1Q96PY6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
NEK1Q96PY6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
NEK1Q96PY6 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC22.86■■□□□ 1.25
NEK1Q96PY6 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC22.86■■□□□ 1.25
NEK1Q96PY6 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
NEK1Q96PY6 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
NEK1Q96PY6 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC22.85■■□□□ 1.25
NEK1Q96PY6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
NEK1Q96PY6 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
NEK1Q96PY6 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
NEK1Q96PY6 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
NEK1Q96PY6 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
NEK1Q96PY6 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC22.85■■□□□ 1.25
NEK1Q96PY6 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC22.85■■□□□ 1.25
NEK1Q96PY6 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
NEK1Q96PY6 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
NEK1Q96PY6 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
NEK1Q96PY6 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
NEK1Q96PY6 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
NEK1Q96PY6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC22.84■■□□□ 1.25
NEK1Q96PY6 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
NEK1Q96PY6 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
NEK1Q96PY6 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
NEK1Q96PY6 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC22.84■■□□□ 1.25
NEK1Q96PY6 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC22.84■■□□□ 1.25
NEK1Q96PY6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC22.84■■□□□ 1.25
NEK1Q96PY6 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC22.84■■□□□ 1.25
NEK1Q96PY6 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC22.84■■□□□ 1.25
NEK1Q96PY6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
NEK1Q96PY6 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
NEK1Q96PY6 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
NEK1Q96PY6 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
NEK1Q96PY6 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
NEK1Q96PY6 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
NEK1Q96PY6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
NEK1Q96PY6 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC22.83■■□□□ 1.25
NEK1Q96PY6 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
NEK1Q96PY6 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
NEK1Q96PY6 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
NEK1Q96PY6 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
NEK1Q96PY6 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
NEK1Q96PY6 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
NEK1Q96PY6 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
NEK1Q96PY6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC22.83■■□□□ 1.25
NEK1Q96PY6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC22.83■■□□□ 1.25
NEK1Q96PY6 KRT18P29-201ENST00000397031 1267 ntBASIC22.83■■□□□ 1.25
NEK1Q96PY6 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
NEK1Q96PY6 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC22.83■■□□□ 1.25
NEK1Q96PY6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC22.83■■□□□ 1.25
NEK1Q96PY6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC22.83■■□□□ 1.25
NEK1Q96PY6 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC22.83■■□□□ 1.25
NEK1Q96PY6 AL160286.2-201ENST00000567150 934 ntBASIC22.83■■□□□ 1.25
NEK1Q96PY6 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
NEK1Q96PY6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC22.83■■□□□ 1.25
NEK1Q96PY6 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC22.83■■□□□ 1.25
NEK1Q96PY6 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.25
NEK1Q96PY6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
NEK1Q96PY6 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC22.83■■□□□ 1.24
NEK1Q96PY6 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
NEK1Q96PY6 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
NEK1Q96PY6 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
NEK1Q96PY6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
NEK1Q96PY6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
NEK1Q96PY6 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
NEK1Q96PY6 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
NEK1Q96PY6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
NEK1Q96PY6 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
NEK1Q96PY6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC22.82■■□□□ 1.24
NEK1Q96PY6 AL161938.1-201ENST00000569833 2180 ntBASIC22.82■■□□□ 1.24
NEK1Q96PY6 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
NEK1Q96PY6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
NEK1Q96PY6 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
NEK1Q96PY6 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
NEK1Q96PY6 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
NEK1Q96PY6 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC22.82■■□□□ 1.24
NEK1Q96PY6 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC22.82■■□□□ 1.24
NEK1Q96PY6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC22.82■■□□□ 1.24
NEK1Q96PY6 CABP2-204ENST00000636477 941 ntTSL 5 BASIC22.82■■□□□ 1.24
NEK1Q96PY6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
NEK1Q96PY6 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
NEK1Q96PY6 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
NEK1Q96PY6 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
NEK1Q96PY6 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC22.82■■□□□ 1.24
NEK1Q96PY6 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC22.82■■□□□ 1.24
NEK1Q96PY6 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
NEK1Q96PY6 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
NEK1Q96PY6 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
NEK1Q96PY6 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms