Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 PGM5P4-201ENST00000421970 445 ntBASIC14.56□□□□□ -0.08
AP1S3Q96PC3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 AC105265.2-201ENST00000467189 838 ntBASIC14.55□□□□□ -0.08
AP1S3Q96PC3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 AC131212.1-201ENST00000613771 668 ntBASIC14.55□□□□□ -0.08
AP1S3Q96PC3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 AC008406.3-201ENST00000620001 1374 ntBASIC14.55□□□□□ -0.08
AP1S3Q96PC3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 GOLGA2P11-201ENST00000562660 1621 ntBASIC14.55□□□□□ -0.08
AP1S3Q96PC3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP1S3Q96PC3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC14.54□□□□□ -0.08
AP1S3Q96PC3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP1S3Q96PC3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP1S3Q96PC3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP1S3Q96PC3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC14.54□□□□□ -0.08
AP1S3Q96PC3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC14.54□□□□□ -0.08
AP1S3Q96PC3 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP1S3Q96PC3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
AP1S3Q96PC3 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
AP1S3Q96PC3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
AP1S3Q96PC3 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP1S3Q96PC3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP1S3Q96PC3 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
AP1S3Q96PC3 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
AP1S3Q96PC3 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
AP1S3Q96PC3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP1S3Q96PC3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC14.54□□□□□ -0.08
AP1S3Q96PC3 CCDC92B-201ENST00000575506 885 ntBASIC14.54□□□□□ -0.08
AP1S3Q96PC3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC14.54□□□□□ -0.08
AP1S3Q96PC3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC14.54□□□□□ -0.08
AP1S3Q96PC3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC14.54□□□□□ -0.08
AP1S3Q96PC3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC14.54□□□□□ -0.08
AP1S3Q96PC3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms