Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF48Q96MX3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF48Q96MX3 TMEM179-206ENST00000616017 1645 ntBASIC15.71■□□□□ 0.11
ZNF48Q96MX3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC15.71■□□□□ 0.1
ZNF48Q96MX3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
ZNF48Q96MX3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ZNF48Q96MX3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
ZNF48Q96MX3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
ZNF48Q96MX3 BX119927.1-201ENST00000636596 1552 ntBASIC15.7■□□□□ 0.1
ZNF48Q96MX3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF48Q96MX3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC15.7■□□□□ 0.1
ZNF48Q96MX3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF48Q96MX3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
ZNF48Q96MX3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF48Q96MX3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC15.7■□□□□ 0.1
ZNF48Q96MX3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC15.7■□□□□ 0.1
ZNF48Q96MX3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
ZNF48Q96MX3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF48Q96MX3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF48Q96MX3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC15.7■□□□□ 0.1
ZNF48Q96MX3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF48Q96MX3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF48Q96MX3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
ZNF48Q96MX3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
ZNF48Q96MX3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.7■□□□□ 0.1
ZNF48Q96MX3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.7■□□□□ 0.1
ZNF48Q96MX3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
ZNF48Q96MX3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.7■□□□□ 0.1
ZNF48Q96MX3 NTF6B-201ENST00000591913 560 ntBASIC15.7■□□□□ 0.1
ZNF48Q96MX3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
ZNF48Q96MX3 AC006011.2-201ENST00000621313 1158 ntBASIC15.7■□□□□ 0.1
ZNF48Q96MX3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF48Q96MX3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF48Q96MX3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
ZNF48Q96MX3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF48Q96MX3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF48Q96MX3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF48Q96MX3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.7■□□□□ 0.1
ZNF48Q96MX3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF48Q96MX3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF48Q96MX3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF48Q96MX3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
ZNF48Q96MX3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC15.7■□□□□ 0.1
ZNF48Q96MX3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
ZNF48Q96MX3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.7■□□□□ 0.1
ZNF48Q96MX3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
ZNF48Q96MX3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF48Q96MX3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC15.69■□□□□ 0.1
ZNF48Q96MX3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF48Q96MX3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
ZNF48Q96MX3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
ZNF48Q96MX3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF48Q96MX3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF48Q96MX3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC15.69■□□□□ 0.1
ZNF48Q96MX3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF48Q96MX3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF48Q96MX3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF48Q96MX3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
ZNF48Q96MX3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF48Q96MX3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
ZNF48Q96MX3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF48Q96MX3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF48Q96MX3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF48Q96MX3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF48Q96MX3 LIN28AP1-201ENST00000429574 405 ntBASIC15.69■□□□□ 0.1
ZNF48Q96MX3 ATP5G1P1-201ENST00000448724 379 ntBASIC15.69■□□□□ 0.1
ZNF48Q96MX3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.69■□□□□ 0.1
ZNF48Q96MX3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.69■□□□□ 0.1
ZNF48Q96MX3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
ZNF48Q96MX3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF48Q96MX3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.69■□□□□ 0.1
ZNF48Q96MX3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
ZNF48Q96MX3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
ZNF48Q96MX3 FAM87A-204ENST00000613235 858 ntBASIC15.69■□□□□ 0.1
ZNF48Q96MX3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF48Q96MX3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.69■□□□□ 0.1
ZNF48Q96MX3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
ZNF48Q96MX3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF48Q96MX3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF48Q96MX3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC15.69■□□□□ 0.1
ZNF48Q96MX3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC15.69■□□□□ 0.1
ZNF48Q96MX3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
ZNF48Q96MX3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF48Q96MX3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF48Q96MX3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
ZNF48Q96MX3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF48Q96MX3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
ZNF48Q96MX3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
ZNF48Q96MX3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF48Q96MX3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF48Q96MX3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC15.68■□□□□ 0.1
ZNF48Q96MX3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.68■□□□□ 0.1
ZNF48Q96MX3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.68■□□□□ 0.1
ZNF48Q96MX3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.68■□□□□ 0.1
ZNF48Q96MX3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF48Q96MX3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
ZNF48Q96MX3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
ZNF48Q96MX3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF48Q96MX3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC15.68■□□□□ 0.1
ZNF48Q96MX3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms