Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VPS50Q96JG6 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VPS50Q96JG6 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.85■□□□□ 0.61
VPS50Q96JG6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VPS50Q96JG6 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.85■□□□□ 0.61
VPS50Q96JG6 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
VPS50Q96JG6 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
VPS50Q96JG6 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
VPS50Q96JG6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VPS50Q96JG6 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS50Q96JG6 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.84■□□□□ 0.61
VPS50Q96JG6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.84■□□□□ 0.61
VPS50Q96JG6 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.84■□□□□ 0.61
VPS50Q96JG6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS50Q96JG6 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.84■□□□□ 0.61
VPS50Q96JG6 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS50Q96JG6 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS50Q96JG6 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
VPS50Q96JG6 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS50Q96JG6 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
VPS50Q96JG6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VPS50Q96JG6 HLA-G-202ENST00000376815 851 ntBASIC18.84■□□□□ 0.61
VPS50Q96JG6 HLA-G-203ENST00000376818 1127 ntBASIC18.84■□□□□ 0.61
VPS50Q96JG6 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.84■□□□□ 0.61
VPS50Q96JG6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.84■□□□□ 0.61
VPS50Q96JG6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.84■□□□□ 0.61
VPS50Q96JG6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.84■□□□□ 0.61
VPS50Q96JG6 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS50Q96JG6 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.84■□□□□ 0.61
VPS50Q96JG6 AC008550.1-201ENST00000511500 884 ntBASIC18.84■□□□□ 0.61
VPS50Q96JG6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VPS50Q96JG6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.84■□□□□ 0.61
VPS50Q96JG6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VPS50Q96JG6 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS50Q96JG6 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.84■□□□□ 0.61
VPS50Q96JG6 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.84■□□□□ 0.61
VPS50Q96JG6 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
VPS50Q96JG6 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VPS50Q96JG6 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS50Q96JG6 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS50Q96JG6 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS50Q96JG6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS50Q96JG6 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VPS50Q96JG6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
VPS50Q96JG6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VPS50Q96JG6 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS50Q96JG6 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VPS50Q96JG6 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VPS50Q96JG6 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VPS50Q96JG6 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
VPS50Q96JG6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VPS50Q96JG6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VPS50Q96JG6 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VPS50Q96JG6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
VPS50Q96JG6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
VPS50Q96JG6 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VPS50Q96JG6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.83■□□□□ 0.61
VPS50Q96JG6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.83■□□□□ 0.61
VPS50Q96JG6 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VPS50Q96JG6 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VPS50Q96JG6 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VPS50Q96JG6 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.83■□□□□ 0.6
VPS50Q96JG6 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
VPS50Q96JG6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.83■□□□□ 0.6
VPS50Q96JG6 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.83■□□□□ 0.6
VPS50Q96JG6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.83■□□□□ 0.6
VPS50Q96JG6 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VPS50Q96JG6 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
VPS50Q96JG6 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
VPS50Q96JG6 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VPS50Q96JG6 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.83■□□□□ 0.6
VPS50Q96JG6 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VPS50Q96JG6 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VPS50Q96JG6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VPS50Q96JG6 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VPS50Q96JG6 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VPS50Q96JG6 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
VPS50Q96JG6 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VPS50Q96JG6 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VPS50Q96JG6 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VPS50Q96JG6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VPS50Q96JG6 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VPS50Q96JG6 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
VPS50Q96JG6 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS50Q96JG6 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS50Q96JG6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
VPS50Q96JG6 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.82■□□□□ 0.6
VPS50Q96JG6 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS50Q96JG6 AC090340.1-201ENST00000620778 4980 ntBASIC18.82■□□□□ 0.6
VPS50Q96JG6 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS50Q96JG6 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.82■□□□□ 0.6
VPS50Q96JG6 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
VPS50Q96JG6 AC239809.2-201ENST00000415381 517 ntBASIC18.82■□□□□ 0.6
VPS50Q96JG6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.82■□□□□ 0.6
VPS50Q96JG6 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.82■□□□□ 0.6
VPS50Q96JG6 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.82■□□□□ 0.6
VPS50Q96JG6 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.82■□□□□ 0.6
VPS50Q96JG6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.82■□□□□ 0.6
VPS50Q96JG6 AP001412.1-201ENST00000608405 714 ntBASIC18.82■□□□□ 0.6
VPS50Q96JG6 AC006557.6-201ENST00000623071 864 ntBASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms