Protein–RNA interactions for Protein: Q96DX7

TRIM44, Tripartite motif-containing protein 44, humanhuman

Predicted RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM44Q96DX7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM44Q96DX7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
TRIM44Q96DX7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM44Q96DX7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM44Q96DX7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
TRIM44Q96DX7 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC21.83■■□□□ 1.09
TRIM44Q96DX7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM44Q96DX7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM44Q96DX7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM44Q96DX7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.83■■□□□ 1.09
TRIM44Q96DX7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM44Q96DX7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.83■■□□□ 1.09
TRIM44Q96DX7 AC004987.1-201ENST00000428627 508 ntBASIC21.83■■□□□ 1.09
TRIM44Q96DX7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.83■■□□□ 1.09
TRIM44Q96DX7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM44Q96DX7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.83■■□□□ 1.09
TRIM44Q96DX7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.83■■□□□ 1.09
TRIM44Q96DX7 RARRES2P11-201ENST00000635158 484 ntBASIC21.83■■□□□ 1.09
TRIM44Q96DX7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
TRIM44Q96DX7 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC21.83■■□□□ 1.09
TRIM44Q96DX7 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM44Q96DX7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM44Q96DX7 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC21.83■■□□□ 1.08
TRIM44Q96DX7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM44Q96DX7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM44Q96DX7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM44Q96DX7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM44Q96DX7 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM44Q96DX7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
TRIM44Q96DX7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM44Q96DX7 KRT8P33-201ENST00000508125 1423 ntBASIC21.82■■□□□ 1.08
TRIM44Q96DX7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.82■■□□□ 1.08
TRIM44Q96DX7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.82■■□□□ 1.08
TRIM44Q96DX7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM44Q96DX7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM44Q96DX7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM44Q96DX7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM44Q96DX7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
TRIM44Q96DX7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.82■■□□□ 1.08
TRIM44Q96DX7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM44Q96DX7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM44Q96DX7 AL033527.3-201ENST00000566366 1196 ntBASIC21.82■■□□□ 1.08
TRIM44Q96DX7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
TRIM44Q96DX7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC21.82■■□□□ 1.08
TRIM44Q96DX7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
TRIM44Q96DX7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
TRIM44Q96DX7 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
TRIM44Q96DX7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM44Q96DX7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM44Q96DX7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.82■■□□□ 1.08
TRIM44Q96DX7 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM44Q96DX7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM44Q96DX7 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
TRIM44Q96DX7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.81■■□□□ 1.08
TRIM44Q96DX7 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
TRIM44Q96DX7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM44Q96DX7 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM44Q96DX7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM44Q96DX7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.81■■□□□ 1.08
TRIM44Q96DX7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM44Q96DX7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
TRIM44Q96DX7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.81■■□□□ 1.08
TRIM44Q96DX7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM44Q96DX7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM44Q96DX7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM44Q96DX7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
TRIM44Q96DX7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC21.81■■□□□ 1.08
TRIM44Q96DX7 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM44Q96DX7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM44Q96DX7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM44Q96DX7 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM44Q96DX7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.81■■□□□ 1.08
TRIM44Q96DX7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
TRIM44Q96DX7 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM44Q96DX7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM44Q96DX7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.8■■□□□ 1.08
TRIM44Q96DX7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
TRIM44Q96DX7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
TRIM44Q96DX7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM44Q96DX7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
TRIM44Q96DX7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM44Q96DX7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.8■■□□□ 1.08
TRIM44Q96DX7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM44Q96DX7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM44Q96DX7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.8■■□□□ 1.08
TRIM44Q96DX7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM44Q96DX7 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM44Q96DX7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM44Q96DX7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM44Q96DX7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM44Q96DX7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM44Q96DX7 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM44Q96DX7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
TRIM44Q96DX7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM44Q96DX7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM44Q96DX7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
TRIM44Q96DX7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM44Q96DX7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM44Q96DX7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
TRIM44Q96DX7 AC245052.3-201ENST00000450182 901 ntBASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms