Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 AC120498.8-201ENST00000614275 531 ntBASIC19.5■□□□□ 0.71
LRRC39Q96DD0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
LRRC39Q96DD0 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC39Q96DD0 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC39Q96DD0 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC39Q96DD0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.5■□□□□ 0.71
LRRC39Q96DD0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC39Q96DD0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.5■□□□□ 0.71
LRRC39Q96DD0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC39Q96DD0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC39Q96DD0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.5■□□□□ 0.71
LRRC39Q96DD0 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC39Q96DD0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC39Q96DD0 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.5■□□□□ 0.71
LRRC39Q96DD0 AL031598.1-201ENST00000561511 1773 ntBASIC19.49■□□□□ 0.71
LRRC39Q96DD0 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.49■□□□□ 0.71
LRRC39Q96DD0 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC39Q96DD0 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.49■□□□□ 0.71
LRRC39Q96DD0 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC39Q96DD0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC39Q96DD0 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC39Q96DD0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC39Q96DD0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC39Q96DD0 IRX1P1-201ENST00000438849 1838 ntBASIC19.49■□□□□ 0.71
LRRC39Q96DD0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.49■□□□□ 0.71
LRRC39Q96DD0 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
LRRC39Q96DD0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC39Q96DD0 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC39Q96DD0 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.49■□□□□ 0.71
LRRC39Q96DD0 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC39Q96DD0 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
LRRC39Q96DD0 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
LRRC39Q96DD0 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.49■□□□□ 0.71
LRRC39Q96DD0 TUBB8P6-201ENST00000436895 1288 ntBASIC19.49■□□□□ 0.71
LRRC39Q96DD0 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.49■□□□□ 0.71
LRRC39Q96DD0 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.49■□□□□ 0.71
LRRC39Q96DD0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.49■□□□□ 0.71
LRRC39Q96DD0 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.49■□□□□ 0.71
LRRC39Q96DD0 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC39Q96DD0 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC39Q96DD0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC39Q96DD0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
LRRC39Q96DD0 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.49■□□□□ 0.71
LRRC39Q96DD0 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC39Q96DD0 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC39Q96DD0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.49■□□□□ 0.71
LRRC39Q96DD0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
LRRC39Q96DD0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.49■□□□□ 0.71
LRRC39Q96DD0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
LRRC39Q96DD0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
LRRC39Q96DD0 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
LRRC39Q96DD0 Z98044.1-201ENST00000632503 1764 ntBASIC19.48■□□□□ 0.71
LRRC39Q96DD0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC39Q96DD0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
LRRC39Q96DD0 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC39Q96DD0 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC39Q96DD0 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.48■□□□□ 0.71
LRRC39Q96DD0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.48■□□□□ 0.71
LRRC39Q96DD0 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.48■□□□□ 0.71
LRRC39Q96DD0 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.48■□□□□ 0.71
LRRC39Q96DD0 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.48■□□□□ 0.71
LRRC39Q96DD0 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.48■□□□□ 0.71
LRRC39Q96DD0 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC39Q96DD0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC39Q96DD0 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC39Q96DD0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.48■□□□□ 0.71
LRRC39Q96DD0 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
LRRC39Q96DD0 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC39Q96DD0 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC39Q96DD0 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
LRRC39Q96DD0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC39Q96DD0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC39Q96DD0 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC39Q96DD0 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.47■□□□□ 0.71
LRRC39Q96DD0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC39Q96DD0 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
LRRC39Q96DD0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
LRRC39Q96DD0 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC39Q96DD0 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC39Q96DD0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC39Q96DD0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC39Q96DD0 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.47■□□□□ 0.71
LRRC39Q96DD0 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.47■□□□□ 0.71
LRRC39Q96DD0 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC39Q96DD0 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.47■□□□□ 0.71
LRRC39Q96DD0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC39Q96DD0 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC39Q96DD0 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.47■□□□□ 0.71
LRRC39Q96DD0 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
LRRC39Q96DD0 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.47■□□□□ 0.71
LRRC39Q96DD0 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.47■□□□□ 0.71
LRRC39Q96DD0 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.47■□□□□ 0.71
LRRC39Q96DD0 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC39Q96DD0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.47■□□□□ 0.71
LRRC39Q96DD0 FEM1AP3-201ENST00000403722 1741 ntBASIC19.47■□□□□ 0.71
LRRC39Q96DD0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC39Q96DD0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC39Q96DD0 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC39Q96DD0 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC39Q96DD0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms